| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1083147 | 64 (1.070) | 7 (0.130) | 7/224 | NT | 9.9% | coding (2797/3822 nt) | PP_0938 | hypothetical protein |
| ? | NC_002947 | = 1083171 | 67 (1.200) | coding (2821/3822 nt) | PP_0938 | hypothetical protein | |||||
CGCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1082991‑1083147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccgGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA < NC_002947/1083171‑1083023 CGCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAAC < 2:659036/150‑1 CGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCC < 1:1591196/150‑1 GCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCG > 2:847102/1‑150 GGCAAGAGTAGGCGGGCCGGCTGGCTGGAGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCAGCGGCCAGTTGCAAGCCCTAGGCATGGACCTGAACCAGCCCGGGCCGCCCTGGGCCAGGCGGACCACGG < 2:599589/150‑1 CCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGA > 1:155948/1‑110 CCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGA < 2:155948/110‑1 AGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG < 1:209281/105‑1 AGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG > 2:209281/1‑105 CATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC < 1:1370323/72‑1 CATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC > 2:1370323/1‑72 CCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC < 2:484822/150‑1 CCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTC > 1:1353261/1‑150 CAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:613062/1‑150 CAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCT > 1:412398/1‑150 AGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGGCGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCCGCCGGCCCGCCTGCTCTT > 2:1007271/1‑150 GCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAAGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGC < 1:1415586/150‑1 CGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCA > 2:506372/1‑150 GGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA < 1:506372/150‑1 CGCGGGCGCCTGGAGACCCTGGACCTGGCCCCTTGGCAAGAGCAGGCGGGCCGGCTGGCTGGGGACGACCCCGGTGGCAGCGCGCGGCAGAACCTGCAAAGCGTCGACCTGAGCATCGGCCAGTTGAAAGCCTTCGGCATGGACCTGAACCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1082991‑1083147‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccgGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTTCAGGTCCATGCCGAAGGCTTTCAACTGGCCGATGCTCAGGTCGACGCTTTGCAGGTTCTGCCGCGCGCTGCCACCGGGGTCGTCCCCAGCCAGCCGGCCCGCCTGCTCTTGCCAA < NC_002947/1083171‑1083023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |