| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1096638 = | 51 (0.850) | 4 (0.070) | 4/230 | NT | 7.9% | coding (329/726 nt) | lptB | ABC transporter ATP‑binding protein |
| ? | NC_002947 | 1096660 = | 44 (0.770) | coding (307/726 nt) | lptB | ABC transporter ATP‑binding protein | |||||
GTACTGATCGACAACCTCGATGTCAGCCACCAGCCCATGCACGGCCGCGCCCGTGCCGGAATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1096789‑1096638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgaGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTG > NC_002947/1096660‑1096759 GTACTGATCGACAACCTCGATGTCAGCCACCAGCCCATGCACGGCCGCGCCCGTGCCGGAATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTC > 1:660039/1‑150 CATCCTCGAGACCCGCAAGGACCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCA > 1:247834/1‑104 CATCCTCGAGACCCGCAAGGACCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCA < 2:247834/104‑1 GACCCGCAAGGACCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATC < 1:925942/62‑1 GACCCGCAAGGACCTCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATC > 2:925942/1‑62 TCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTG > 1:314468/1‑104 TCGAGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTG < 2:314468/104‑1 GTACTGATCGACAACCTCGATGTCAGCCACCAGCCCATGCACGGCCGCGCCCGTGCCGGAATCGGCTACCTGCCGCAGGAAGCCTCGATCTTCCGCAAGCTGTCGGTCGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGACCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1096789‑1096638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgaGGATGGCCATGATGTTGTCGGCGACCGACAGCTTGCGGAAGATCGAGGCTTCCTGCGGCAGGTAGCCGATTCCGGCACGGGCGCGGCCGTGCATGGGCTG > NC_002947/1096660‑1096759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |