New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1223780 | 52 (0.870) | 8 (0.140) | 8/228 | NT | 13.7% | coding (272/771 nt) | gltL | glutamate/aspartate ABC transporter ATP binding protein |
? | NC_002947 | = 1223795 | 51 (0.900) | coding (257/771 nt) | gltL | glutamate/aspartate ABC transporter ATP binding protein |
GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1223627‑1223780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT < NC_002947/1223795‑1223647 GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG > 2:82062/1‑150 CATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGC < 1:783735/150‑1 GGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGACAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA < 2:322965/150‑1 GGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGG > 1:1541536/1‑150 CAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGGT < 2:1541536/150‑1 GCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG < 1:1463460/99‑1 GCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG > 2:1463460/1‑99 GCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTG < 2:1532703/89‑1 GCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTG > 1:1532703/1‑89 TGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGG < 1:697302/94‑1 TGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATGG > 2:697302/1‑94 AGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATG < 1:396329/81‑1 AGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGCGCGTGGGCATG > 2:396329/1‑81 CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACC < 2:144234/150‑1 CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTG < 1:1596030/137‑1 CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTG > 2:1596030/1‑137 CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG > 2:1454061/1‑128 CCAAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG < 1:1454061/128‑1 AAGCTGCCCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT < 1:654658/150‑1 GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1223627‑1223780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGCGCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACCGT < NC_002947/1223795‑1223647 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |