| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1421210 | 48 (0.800) | 3 (0.050) | 3/230 | NT | 5.9% | coding (683/891 nt) | PP_1245 | hypothetical protein |
| ? | NC_002947 | = 1421225 | 49 (0.850) | coding (698/891 nt) | PP_1245 | hypothetical protein | |||||
GGTCGGCAGCCTGAAGAACCACACCGAATTCACCGCCGTGGGCTCCACCGGTGACTGGATTCTGGTCGGCCGCAAGGGTGTGACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1421058‑1421210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCGGTGAATTCGGTGTG < NC_002947/1421225‑1421077 GGTCGGCAGCCTGAAGAACCACACCGAATTCACCGCCGTGGGCTCCACCGGTGACTGGATTCTGGTCGGCCGCAAGGGTGTGACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCC > 2:1353549/1‑150 gtcgtaAGCCCGAAGAACCACACCGAATTCACCGCTGTGGGCGTAATCGGTGACTGGATTCTGGTCGGCCGCAAGGGTCTGACCGTTGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCA < 2:355483/144‑1 GTCGGCAGCCTGAAGAACCACACCGAATTCACCGCCGTGGGCTCCACCGGTGACTGGATTCTGGTCGGCCGCAAGGGTGTGACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCA > 1:303583/1‑150 CGGCAGCCTGAAGAACCACACCGAATTCACCGCCGTGGGCTCCACCGGTGACTGGATTCTGGTCGGCCGCAAGGGTGTGACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAGC < 1:1290481/150‑1 ACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAGCTCGTCCAGGTTGACG‑GCTGG < 1:1358561/91‑1 ACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAGCTCGTCCAGGTTGACG‑GCTGG > 2:1358561/1‑91 CTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAG < 1:167663/47‑1 CTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAG > 2:167663/1‑47 GCCAAGCGCGTAACGCCAGC‑CGTCAACCTGGACGAGCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCA > 2:426736/1‑150 GCTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCGGTGAATTCGGTGT > 1:1353549/1‑150 GCTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCG > 1:1589972/1‑137 GCTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCG < 2:1589972/137‑1 GCTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTGGGCGACCTCTTG‑CGACTTGGGCTCG‑ACGTAGTGCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCGGTGAATTCGGTGT > 2:61298/1‑150 CTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGAGCCCTTCACGCC‑‑GGGTTGGTGCGGAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCGGTGAATTCGGTGTG < 2:42807/150‑1 GGTCGGCAGCCTGAAGAACCACACCGAATTCACCGCCGTGGGCTCCACCGGTGACTGGATTCTGGTCGGCCGCAAGGGTGTGACCGTGGGCTATGTGCACAAGAACTACGTCGAGCCCAAGGCGCAAGCGGTCGCCAAGCGCGTAACGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1421058‑1421210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcTCGTCCAGGTTGACG‑GCTGGCGTTACGCGCTTGGCGACCGCTTG‑CGCCTTGGGCTCG‑ACGTAGTTCTTGTGCACATAGCCCACGGTCACACCCTTGCGGCCGACCAGAATCCAGTCACCGGTGGAGCCCACGGCGGTGAATTCGGTGTG < NC_002947/1421225‑1421077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |