New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1440042 | 28 (0.470) | 6 (0.110) | 6/226 | NT | 14.6% | intergenic (‑366/‑293) | yveA/PP_1260 | aspartate‑proton symporter/transposase |
? | NC_002947 | = 5453079 | 44 (0.780) | intergenic (+44/‑311) | lnt/PP_4791 | apolipoprotein N‑acyltransferase/transposase |
AAAGCCATACCGGATAAGGGTTTGAGAGATGCAGTGCTAGTGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1439891‑1440042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagcCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAATCAGACGGTTTTTGCAATACGCCCTGCCAGCAACGCCCAGCCCAGCAGCAATGCACAGACAATCGCCAGCGGCCATGAGCGCCATTGCAGGTAAGGCGTCAGCT < NC_002947/5453079‑5452932 AAAGCCATACCGGATAAGGGTTTGAGAGATGCAGTGCTAGTGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCA > 2:877861/1‑150 GCCCTTTCGCGGGTGAACCCGCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCGACAGCGCAGCCCGGAAG < 1:791324/114‑1 GCCCTTTCGCGGGTGAACCCGCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCGACAGCGCAGCCCGGAAG > 2:791324/1‑114 CAGCCCTTCCGGGCTGCGCTGTCGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAA < 1:179419/74‑1 CAGCCCTTCCGGGCTGCGCTGTCGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAA > 2:179419/1‑74 TTCCGGGCTGCGCTGTCGCGCAGCCCGGCAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAAT > 1:576583/1‑69 TTCCGGGCTGCGCTGTCGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAAT < 2:576583/69‑1 CAGCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAATCAGACGGTTTTTGCAATACGCCCTGCCAGCAACGCCCAGCCCAGCAGCAATGCACAGACAATCGCCAGCGGCCATGAGCGCCATTGCAGGTAAGGCGTCAG > 2:595189/1‑150 AGCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAATCAGACGGTTTTTGCAATACGCCCTGCCAGCAACGCCCAGCCCAGCAGCAATGCACAGACAATCGCCAGCGGCCATGAGCGCCATTGCAGGTAAGGCGTCAGC < 2:688515/150‑1 GCCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAATCAGACGGTTTTTGCAATACGCCCTGCCAGCAACGCCCAGCCCAGCAGCAATGCACAGACAATCGCCAGCGGCCATGAGCGCCATTGCAGGTAAGGCGTCAGCT < 2:1509687/150‑1 AAAGCCATACCGGATAAGGGTTTGAGAGATGCAGTGCTAGTGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACAGGTACGGCGCAGAATTCGAAATCTGTGGGGGCCCTGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1439891‑1440042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagcCCGGAAGGGCTGGGTGATCTCCTACAGTGGTCGCGTATCGTCAATCAGACGGTTTTTGCAATACGCCCTGCCAGCAACGCCCAGCCCAGCAGCAATGCACAGACAATCGCCAGCGGCCATGAGCGCCATTGCAGGTAAGGCGTCAGCT < NC_002947/5453079‑5452932 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |