New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1600503 | 77 (1.290) | 5 (0.090) | 3/230 | NT | 6.1% | coding (723/2292 nt) | bglX | beta‑D‑glucoside glucohydrolase |
? | NC_002947 | = 1600523 | 80 (1.390) | coding (703/2292 nt) | bglX | beta‑D‑glucoside glucohydrolase |
CACCATCACGCCACCGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1600482‑1600503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccc‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA < NC_002947/1600523‑1600378 CACCATCACGCCACCGGCACCCGCATCGAG‑CGCGGCGCGAT‑AGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGG > 2:1377920/1‑150 CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG < 1:129198/41‑1 CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG < 1:949419/41‑1 CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGCGG > 2:129198/1‑41 CATCACGCCACCGGCACCC‑TATCGCGCCGC‑GCTCGATGAGG > 2:949419/1‑41 ACCC‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA > 1:268288/1‑150 CACCATCACGCCACCGGCACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1600482‑1600503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccc‑TATCGCGCCGC‑GCTCGATGCGGGTGCCGGTGGCGTGATGGTGGCGCTGAACTCGATCAACGGCGTACCGGCCACCTCCAACACCTGGCTGATGAACGACCTGCTGCGCAAGGAGTGGGGCTTCAAGGGCGTGACCATCAGCGACCA < NC_002947/1600523‑1600378 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |