New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1607234 | 56 (0.940) | 6 (0.100) | 6/230 | NT | 10.0% | coding (342/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
? | NC_002947 | = 1607244 | 54 (0.940) | coding (332/888 nt) | PP_1408 | (R)‑3‑hydroxydecanoyl‑ACP:CoA transacylase |
TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGTCGCAGGCGGCCAGGTACTGGCAGCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607085‑1607234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA < NC_002947/1607244‑1607097 TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGCCGCAGGCGGCCAGGTACTGGCACCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG > 2:656899/1‑150 GTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCTGCTGGCGCTGGC‑GCACCAGCCGC > 1:1072228/1‑97 GTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCTGCTGGCGCTGGC‑GCACCAGCCGC < 2:1072228/97‑1 GAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGCGCTGGC‑GCACCAGCCGCGGTACGT < 1:1080098/65‑1 GAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGGCGCTGGC‑GCACCAGCCGCGGTACGT > 2:1080098/1‑65 TCACCACTGCCTTCTTCACGTACCGCGGCTGGTGC‑GCCAGCGCCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGC < 1:46340/101‑1 TCACCACTGCCTTCTTCACGTACCGCGGCTGGTGC‑GCCAGCGCCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGC > 2:46340/1‑101 GGCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA < 2:663421/150‑1 GGCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTAGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA < 1:834570/150‑1 TTGCCGATGGTGTCATTGACCAGGTTGCCGACCTGATAACGGTCGCAGGCGGCCAGGTACTGGCAGCCACGGTCCAGATAGTCGCGCATCGGCTCGTTGATCACTGGCGAGAACGAACTCACCACTGCCTTCTTCACGTACCGCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1607085‑1607234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggCGCTGGC‑GCACCAGCCGCGGTACGTGAAGAAGGCAGTGGTGAGTTCGTTCTCGCCAGTGATCAACGAGCCGATGCGCGACTATCTGGACCGTGGCTGCCAGTACCTGGCCGCCTGCGACCGTTATCAGGTCGGCAACCTGGTCAATGA < NC_002947/1607244‑1607097 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |