New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1612894 = | 54 (0.900) | 5 (0.090) | 5/220 | NT | 10.1% | coding (649/693 nt) | ung | uracil‑DNA glycosylase |
? | NC_002947 | 1612936 = | 40 (0.730) | coding (691/693 nt) | ung | uracil‑DNA glycosylase |
GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613051‑1612894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT > NC_002947/1612936‑1613082 GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGC < 1:1358032/150‑1 CCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCC < 2:1567607/150‑1 GCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGC > 2:1409504/1‑51 GCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGC < 1:1409504/51‑1 TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC < 1:121620/150‑1 TCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC > 2:121620/1‑150 ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCACTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGG < 2:1320653/96‑1 ACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCACTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGG > 1:1320653/1‑96 AGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCA > 2:1355957/1‑150 CCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGC > 1:499589/1‑59 CCCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGC < 2:499589/59‑1 CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTG < 1:643205/150‑1 CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTG > 2:1562862/1‑150 CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGGCGGTGATGCCGGTGTCCTG < 2:965495/150‑1 CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC > 2:1188416/1‑112 CCCGCTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTAC < 1:1188416/112‑1 CTGTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT < 2:577876/150‑1 GCCTTGGTGGAGTACGTGCGCCAGAACCATGAGCGGGGGATTGCCATTGGCCAGCGCAGCGAGCCGCGCATGAGCATGACGCCCTGAGCGATTGCGTACCCCACCGCGGTTTCTCACAGCGGGGGCAGTGCCCAGTCGATGGGCCCGAGCCCCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1613051‑1612894 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctgTGAGAAACCGCGGTGGGGTACGCAATCGCTCAGGGCGTCATGCTCATGCGCGGCTCGCTGCGCTGGCCAATGGCAATCCCCCGCTCATGGTTCTGGCGCACGTACTCCACCAAGGCTTCAAGGTCGGTGATGCCGGTGTCCTGGCGT > NC_002947/1612936‑1613082 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |