New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1923945 =	59 (0.990)	5 (0.090)	5/232	NT	7.6%	coding (137/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease
	?	NC_002947	1923969 =	64 (1.110)					coding (113/795 nt)	PP_1723	2‑aminoethylphosphonate ABC transporter permease

ACTCGCTGGCCACCAGCTGGTCGGCGAGCCTGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1923984‑1923945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC  >  NC_002947/1923969‑1924116                                                                                                                                                                                              ACTCGCTGGCCACCAGCTGGTCGGCGAGCCT‑‑‑‑‑‑‑‑GCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCAGGATCGGATGTCAGCGCGCATGGTAG                                >  2:776617/1‑150            ACCAGCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGG                                                                           <  1:1296854/104‑1            ACCAGCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGG                                                                           >  2:1296854/1‑104                GCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGG                                                                                                      >  1:1599273/1‑73                GCTGGTCGGCGAGCCTGCTGCCCAGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGG                                                                                                      <  2:1599273/73‑1                                       AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC  <  2:1300248/150‑1                                       AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAT              <  1:1040748/138‑1                                       AGCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCAT              >  2:1040748/1‑138                                                                                                                                                                                              ACTCGCTGGCCACCAGCTGGTCGGCGAGCCTGCTGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1923984‑1923945 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCTGGTGGCCAGCGAGTAGAGGAGGGTGCCGGCCAGGGGCAGCAGCAGGATCAGGAACAGCAGGTAGACCACGAGGCGGTGGTACCAGCCGCCGGAACGGATGTCAGCGCGCATGGTAGCTCCTTTTCAGCAGCCATTGATGTACCACC  >  NC_002947/1923969‑1924116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.