New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2476606 =	61 (1.020)	5 (0.090)	5/230	NT	7.9%	coding (98/699 nt)	PP_2170	chorismate mutase family protein
	?	NC_002947	2476645 =	58 (1.010)					coding (137/699 nt)	PP_2170	chorismate mutase family protein

GATGACCTGAAACCCTTGATACACGCAGGATACCCAGTCCATTTCGAATAACCTGCTCACACCTTCGTGGCGCAGATCGCGAAAATGCAGATCCGCCACGCCAACCATCTGTCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2476758‑2476606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGATCTGCGCCACGAAGGTGTGAGCAGGTTATTCGAAATGGACTGGGTATCCTGCGTGTATCAAGGGTTTCAGGTC  >  NC_002947/2476645‑2476755                                                                                                                                                                                                                                                                          GATGACCTGAAACCCTTGATACACGCAGGATACCCAGTCCATTTCGAATAACCTGCTCACACCTTCGTGGCGCAGATCGCGAAAATGCAGATCCGCCACGCCAACCATCTGTCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCT                                                                                                                    >  2:389059/1‑150  ATGACCTGAAACCCTTGATACACGCAGGATACCCAGTCCATTTCGAATAACCTGCTCACACCTTCGTGGCGCAGATCGCGAAAATGCAGATCCGCCACGCCAACCATCTGTCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTG                                                                                                                   >  2:1320689/1‑150   TGACCTGAAACCCTTGATACACGCAGGATACCCAGTCCATTTCGAATAACCTGCTCACACCTTCGTGGCGCAGATCGCGAAAATGCAGATCCGCCACGCCAACCATCTGTCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGG                                                                                                                  <  1:1032969/150‑1                                                                                                                TCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGGCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGAT                                                                          >  1:1435654/1‑81                                                                                                                TCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGGCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGAT                                                                          <  2:1435654/81‑1                                                                                                                  GCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGGCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGATCTGCGCCACGAAGGTGTGAGCAGGTTATTCGAAATGGACTGG                                >  1:1601439/1‑121                                                                                                                  GCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGGCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGATCTGCGCCACGAAGGTGTGAGCAGGTTATTCGAAATGGACTGG                                <  2:1601439/121‑1                                                                                                                   CCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGGCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGATCTGCGCCACGAAGGTGTGAGCAGGTTATTCGAGATGGACTGGGTATCCTGCGTGTATCAAGGGTTTCAGGTC  >  1:1088576/1‑150                                                                                                                                                                                                                                                                          GATGACCTGAAACCCTTGATACACGCAGGATACCCAGTCCATTTCGAATAACCTGCTCACACCTTCGTGGCGCAGATCGCGAAAATGCAGATCCGCCACGCCAACCATCTGTCGCCCAGGCTTGGGCCGCCTGCTGGCGGGCGAATGTCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2476758‑2476606 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggCGACAGATGGTTGGCGTGGCGGATCTGCATTTTCGCGATCTGCGCCACGAAGGTGTGAGCAGGTTATTCGAAATGGACTGGGTATCCTGCGTGTATCAAGGGTTTCAGGTC  >  NC_002947/2476645‑2476755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.