New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3952534 | 65 (1.090) | 4 (0.070) | 3/230 | NT | 6.4% | coding (60/657 nt) | PP_3488 | Sco1/SenC family protein |
? | NC_002947 | = 3952560 | 54 (0.940) | coding (34/657 nt) | PP_3488 | Sco1/SenC family protein |
TGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3952419‑3952534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGGCCCACGCCGGTCACGCGCATGACGGCCATGCCGGGCAGCCCCCGGCGGCGCACCAGGAAAAGACCAGTGTGCGTTTTGCCGATGTGTCGCTGCTGAACCAGGACGGCATGCCGG < NC_002947/3952560‑3952413 TGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGG < 2:929310/150‑1 CCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGGCC < 1:286049/150‑1 GCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGG > 1:1431253/1‑135 GCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGG < 2:1431253/135‑1 CCCTGAGCCTGGCATTCGCCAGCCACCTTGCCATGGCCCACGCCGGTCACGCGCATGACGGCCATGCCGGGCAGCCCCCGGCGGCGCACCAGGAAACGACCAGTGTGCGTTTTGCCGATGCGTCGCTGCTGAACCAGGACGGCCTGCCGG > 2:114446/1‑150 CCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGGCCCACGCCGGTCACGCGCATGACGGCCATG < 1:1576822/66‑1 CCCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGGCCCACGCCGGTCACGCGCATGACGGCCATG > 2:1576822/1‑66 TGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3952419‑3952534 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccCTGAGCCTGGCATTCGCCAGCCACCTGGCCATGGCCCACGCCGGTCACGCGCATGACGGCCATGCCGGGCAGCCCCCGGCGGCGCACCAGGAAAAGACCAGTGTGCGTTTTGCCGATGTGTCGCTGCTGAACCAGGACGGCATGCCGG < NC_002947/3952560‑3952413 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |