New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4308166 =	58 (0.970)	4 (0.070)	4/230	NT	6.9%	coding (126/156 nt)	PP_3780	hypothetical protein
	?	NC_002947	4308188 =	52 (0.910)					coding (104/156 nt)	PP_3780	hypothetical protein

AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4308318‑4308166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC  >  NC_002947/4308188‑4308336                                                                                                                                                                                                                                                                                                                AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG                                                                                                                                                          >  1:385794/1‑150                                                                                         GCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG                                                                                                                                                          >  1:26181/1‑62                                                                                         GCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACG                                                                                                                                                          <  2:26181/62‑1                                                                                                                   CCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGT                                        >  2:611549/1‑150                                                                                                                    CGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTC                                       <  1:611549/150‑1                                                                                                                               CACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGA                                                                        >  1:268725/1‑106                                                                                                                               CACTTGCACGGGCATGGCGCAACGTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGA                                                                        <  2:268725/106‑1                                                                                                                                                      GTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATAT                                                     <  1:770011/102‑1                                                                                                                                                      GTGCAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATAT                                                     >  2:770011/1‑102                                                                                                                                                         CAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCGCGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC  <  2:972180/150‑1                                                                                                                                                                                                                                                                                                                AATGATTATCCTGCAGCCTGACGCTCAGTGCTGATATACGAGCAGGTGTTCCTCGGCCTGTTGTTCGTGGCGTGGGCCAGGATTGCTGGCAGCGTAGGGTCCCATCTGGGTGGGCCGCTGCTTCACCACTTGCACGGGCATGGCGCAACGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4308318‑4308166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgcAAGTGGTGAAGCAGCGGCCCACCCAGATGGGACCCTACGCTGCCAGCAATCCTGGCCCACGCCACGAACAACAGGCCGAGGAACACCTGCTCGTATATCAGCACTGAGCGTCAGGCTGCAGGATAATCATTCTATTGAGGTTTTCTTGC  >  NC_002947/4308188‑4308336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.