New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4352992 | 44 (0.730) | 4 (0.070) | 4/226 | NT | 8.0% | coding (74/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
? | NC_002947 | = 4353008 | 51 (0.900) | coding (90/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
ACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4352842‑4352992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggcCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAGG < NC_002947/4353008‑4352861 ACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGGTGCCCATTCTGCAGGCACCCATGG > 2:1612372/1‑150 ACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGGGT > 1:1474557/1‑115 ACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGGGT < 2:1474557/115‑1 GCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGG < 1:1625034/86‑1 GCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGG > 2:1625034/1‑86 CATGGCCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCAAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTAGCGGCGAttgttt > 1:23254/1‑144 GCCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAGG < 2:1166911/150‑1 ACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4352842‑4352992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggcCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAGG < NC_002947/4353008‑4352861 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |