New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4417233	81 (1.350)	4 (0.070)	3/224	NT	5.1%	coding (82/552 nt)	PP_3905	LuxR family transcriptional regulator
	?	NC_002947	= 4417293	73 (1.310)					coding (142/552 nt)	PP_3905	LuxR family transcriptional regulator

TCAGCAAGTTTCTTTTGTTCCATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGCTACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4417079‑4417233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcatTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATATTGATGGTGCCCGGATGTTTAGCCACGCCGGG  <  NC_002947/4417293‑4417146                                                                                                                                                                                                                                                                                                                 TCAGCAAGTTTCTTTTGTTCCATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGCTACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGC                                                                                                                                                           >  2:1465103/1‑150    GCAAGTTTCTTTTGTTCGATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGCTACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGC                                                                                                                                                        >  2:839405/1‑150      AAGTTTCTTTTGTTCCATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGCTACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCAT                                                                                                                                                      <  2:938044/150‑1                   tcaATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGATACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCGGGTGGTCCGATCGACCTGGTTCCCCATAACCAGGATGCATTGGTCGTGACGCT                                                                                                                                         >  2:207097/4‑150                                                                       GGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCA                                                                                     <  1:394215/150‑1                                                                                                              CACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCA                                                                                                <  1:1638063/100‑1                                                                                                              CACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCA                                                                                                >  2:1638063/1‑100                                                                                                                                                    GGCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTG                                            <  1:806164/114‑1                                                                                                                                                    GGCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTG                                            >  2:806164/1‑114                                                                                                                                                     GCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATAT                                 <  1:1465111/124‑1                                                                                                                                                     GCTGCATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATAT                                 >  2:1465111/1‑124                                                                                                                                                         CATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATATTGATGGTGCCCGGATGTTTAGCCACGCCGt   <  2:695360/150‑2                                                                                                                                                          ATTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATATTGATGGTGCCCGGATGTTTAGCCACGCCGGG  >  2:331273/1‑150                                                                                                                                                                                                                                                                                                                 TCAGCAAGTTTCTTTTGTTCCATCAAATTTGCCTCAACGGTTGTAGGGACTTGAGAGGCTACCACGGCCCGGCGTGGCTAAACATCCGGGCACCATCAATATGCCACCACACGCTGGTGGTCCGATCGACCTGGTTCCCCATCACCAGGCTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4417079‑4417233 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgcatTGGTCGTGACGCTCGCTGCCATGAACCTCCCGGACCAGGGGAGGGCGAACGCCACGACCGATGCAGCCTGGTGATGGGGAACCAGGTCGATCGGACCACCAGCGTGTGGTGGCATATTGATGGTGCCCGGATGTTTAGCCACGCCGGG  <  NC_002947/4417293‑4417146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.