New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5346655 = | 51 (0.850) | 3 (0.050) | 3/240 | NT | 6.1% | coding (29/870 nt) | PP_4703 | hypothetical protein |
? | NC_002947 | 5346704 = | 41 (0.680) | coding (78/870 nt) | PP_4703 | hypothetical protein |
GCCCTTGGGCGATTCCAGGTCGAGCTGGCCGAGGGCCAGCCCGGTGAGGCTCATGACCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5346716‑5346655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGCCCAAGGGCGACCCCGGCCTGTTCGGCCCGCACAGTATTAGCTGGCGCGTCCATGGCGACTTCCCGAGCATGCTGGTCGGTGGCAT > NC_002947/5346704‑5346793 GCCCTTGGGCGATTCCAGGTCGAGCTGGCCGAGGGCCAGCCCGGTGAGGCTCATGACCTGGGATCGCCCAAGGGCGACCCCGGCCTGTTCGGCCCGCACAGTATTAGCTG < 1:1540380/110‑1 GCCCTTGGGCGATTCCAGGTCGAGCTGGCCGAGGGCCAGCCCGGTGAGGCTCATGACCTGGGATCGCCCAAGGGCGACCCCGGCCTGTTCGGCCCGCACAGTATTAGCTG > 2:1540380/1‑110 CCTTGGGCGATTCCAGGTCGAGCTGGCCGAGGGCCAGCCCGGTGAGGCTCATGACCTGGGATCGCCCAAGGGCGACCCCGGCCTGTTCGGCCCGCACAGTATTAGCTGGCGCGTCCATGGCGACTTCCCGAGCATGCTGGTCGGTGGCAT > 2:1369506/1‑150 GCCCTTGGGCGATTCCAGGTCGAGCTGGCCGAGGGCCAGCCCGGTGAGGCTCATGACCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5346716‑5346655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCGCCCAAGGGCGACCCCGGCCTGTTCGGCCCGCACAGTATTAGCTGGCGCGTCCATGGCGACTTCCCGAGCATGCTGGTCGGTGGCAT > NC_002947/5346704‑5346793 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |