New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5379562	73 (1.220)	3 (0.050)	3/238	NT	4.2%	coding (1099/1674 nt)	recN	DNA repair/recombination protein
	?	NC_002947	= 5379597	63 (1.060)					coding (1134/1674 nt)	recN	DNA repair/recombination protein
Rejected: Frequency below/above cutoff threshold.

GCACCCCACCGAACTGCCCCACCTGCAACAGCAACTGATGGAGGAGCTGGAAGGCCTTAACGCCAGTGACGAGTCGATCGAGCGGCTGGGCGAAGAGCTTGCCGCCTACGCCCAGCACTATAAAGAGAAGGCGCGCGAACTCAGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5379414‑5379562 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCGCCTGCCAGCTGCTGC‑GCTGCTTGCTGGCGCAGGCCGCTGAGTTCGCGCGCCTTCTCTTTATAGTGCTGGGCGTAGGCGGCAAGCTCTTCGCCCAGCCGCTCGATCGACTCGTCACTGGCGTTAAGGCCTTC  <  NC_002947/5379597‑5379463                                                                                                                                                                                                                                                                                               GCACCCCACCGAACTGCCCCACCTGCAACAGCAACTGATGGAGGAGCTGGAAGGCCTTAACGCCAGTGACGAGTCGATCGAGCGGCTGGGCGAAGAGCTTGCCGCCTACGCCCAGCACTATAAAGAGAAGGCGCGCGAACTCAGCGGCCC                                                                                                                                         <  1:87907/150‑1                                     GATGGAGGAGCTGGAAGGCCTTAACGCCAGTGACGAGTCGATCGAGCGGCTGGGCGAAGAGCTTGCCGCCTACGCCCAGCACTATAAAGAGAAGGCGCGCGAACTCAGCGGCCCGCGCCTGCCAGCTGCTGC‑GCTGCTTGCTGGCGCAGG                                                                                                    <  1:58484/150‑1                                        GGAGGAGCTGGAAGGCCTTAACGCCAGTGACGAGTCGATCGAGCGGCTGGGCGAAGAGCTTGCCGCCTACGCCCAGCACTATAAAGAGAAGGCGCGCGAACTCAGCGGCCCGCGCCTGCCAGCTGCTGC‑GCTGCTTGCTGGCGCAGGCCG                                                                                                 >  1:714974/1‑150                                                                                                                                       GCGAACTCAGCGGCCTGCGCCAGCAAGCAGC‑GCAGCAGCTGGCAGGCGCGGGCCGCTGAGTTCGCGCGCCTTCTCTTTATAGTGCTGGGCGTAGGCGGCAAGCTCTTCGCCCAGCCGCTCGATCGACTCGTCACTGGCGTTAAGGCCTTC  >  2:714974/1‑150                                                                                                                                                                                                                                                                                               GCACCCCACCGAACTGCCCCACCTGCAACAGCAACTGATGGAGGAGCTGGAAGGCCTTAACGCCAGTGACGAGTCGATCGAGCGGCTGGGCGAAGAGCTTGCCGCCTACGCCCAGCACTATAAAGAGAAGGCGCGCGAACTCAGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5379414‑5379562 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCGCCTGCCAGCTGCTGC‑GCTGCTTGCTGGCGCAGGCCGCTGAGTTCGCGCGCCTTCTCTTTATAGTGCTGGGCGTAGGCGGCAAGCTCTTCGCCCAGCCGCTCGATCGACTCGTCACTGGCGTTAAGGCCTTC  <  NC_002947/5379597‑5379463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.