New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5383673 = | 61 (1.020) | 4 (0.070) | 4/226 | NT | 7.3% | coding (89/1671 nt) | lldP | L‑lactate permease |
? | NC_002947 | 5383704 = | 44 (0.780) | coding (120/1671 nt) | lldP | L‑lactate permease |
GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5383826‑5383673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaCGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC > NC_002947/5383704‑5383851 GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGG > 1:534622/1‑150 CCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGC < 1:990608/118‑1 CCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGC > 2:990608/1‑118 TGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTC < 1:1047141/142‑1 TGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTC > 2:1047141/1‑142 GCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGtgg > 2:1358866/1‑123 GCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGTGG < 1:1358866/126‑1 AGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGG < 2:476533/150‑1 GGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGT < 1:578504/150‑1 GGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGACCTCTGGCCAATTACCTGGATCATCGTTGCCGCGGT > 1:356397/1‑150 GGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGCAAAGGCTGGCTCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTG > 1:608938/1‑150 CCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTT > 2:1391754/1‑150 CACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGCCTTCGGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC > 1:500503/1‑150 GCAATTGGCCAGAGGCCATAGAGGAAGCCGTAACCCGCGGCGGCGAGGGCCATGTCGACAGGCATCTGGAAGGCGAAGATCGCCACCAGGATCGACAGCGCGAGGGTGATGCTGCCCGCTACGTGGCCCTTGAGGCGGAACACGGCGAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5383826‑5383673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggccaCGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGGCGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATTGCCTGGATCATCGTTGCCGCGGTGTTC > NC_002947/5383704‑5383851 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |