| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5395491 | 63 (1.050) | 7 (0.120) | 6/230 | NT | 10.9% | intergenic (+21/‑80) | hsdR/hsdM | type I restriction modification system endonuclease/type I restriction modification system methylase |
| ? | NC_002947 | = 5395509 | 54 (0.940) | intergenic (+39/‑62) | hsdR/hsdM | type I restriction modification system endonuclease/type I restriction modification system methylase | |||||
CATCAAAATCCTCCAGCTCGATCCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5395341‑5395491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggACAAGGCTCCGCCGTTGCCCACCCAACGGGTAGAGCGGATTAACTGGCGTACAGCGCGTCTTCCAGTTCATGGATAGCTTTGTTGTAGCCAGCTTTGCCGCCAAAGGCTTTAACCAGTTCGATGGGTGCACCGAGCTGGTTAAAGG < NC_002947/5395509‑5395364 CATCAAAATCCTCCAGCTCGATCCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTG > 2:427222/1‑150 ATCAAAATCCTCCAGCTCGATCCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGG < 2:443016/150‑1 CTCGATCCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGGCGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGT > 2:309537/1‑150 CCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGGCGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGTTGCCCA < 1:309537/150‑1 AGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTAGGTGGACAAGGCTCCGCCGTTGCCCACCCAACGGGT < 2:113972/150‑1 ACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGT < 1:458108/107‑1 ACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGT > 2:458108/1‑107 CTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGTTGCCCA > 1:221731/1‑80 CTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGTTGCCCA < 2:221731/80‑1 TGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGTTGCCCACCCAACGGGTAGAGCGGATTAAC < 1:317251/91‑1 TGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGGACAAGGCTCCGCCGTTGCCCACCCAACGGGTAGAGCGGATTAAC > 2:317251/1‑91 GTGGACAAGGCTCCGCCGTTGCCCACCCAACGGGTAGAGCGGATTAACTGGCGTACAGCGCGTCTTCCAGTTCATGGATAGCTTTGTTGTAGCCAGCTTTGCCGCCAAAGGCTTTAACCAGTTCGATGGGTGCACCGAGCTGGTTAAAGG > 1:619389/1‑150 CATCAAAATCCTCCAGCTCGATCCCTTTAACCAGCTCGGTGCACCCATCGAACTGGTTAAAGCCTTTGGCGGCAAAGCTGGCTACAACAAAGCTATCCATGAACTGGAAGACGCGCTGTACGCCAGTTAATCCGCTCTACCCGTTGGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5395341‑5395491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggACAAGGCTCCGCCGTTGCCCACCCAACGGGTAGAGCGGATTAACTGGCGTACAGCGCGTCTTCCAGTTCATGGATAGCTTTGTTGTAGCCAGCTTTGCCGCCAAAGGCTTTAACCAGTTCGATGGGTGCACCGAGCTGGTTAAAGG < NC_002947/5395509‑5395364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |