New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5506637	36 (0.600)	11 (0.240)	9/182	NT	24.6%	intergenic (+48/‑151)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
	?	NC_002947	= 5506650	40 (0.880)					intergenic (+61/‑138)	PP_4839/cycA	iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

CTGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5506460‑5506637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggtaaacccgctcctacAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  <  NC_002947/5506650‑5506504                                                                                                                                                                                                                                                                                                                                       CTGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTG                                                                                                                                                                                 <  1:11682/150‑1 CTGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTG                                                                                                                                                                                 <  1:1247106/150‑1   GGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGC                                                                                                                                                                               <  2:308279/150‑1   GGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGC                                                                                                                                                                               <  2:490876/150‑1          GGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGATGGGGGGGTCGCTGGTGGTGATGTGGGGGGAGGGCAGTCTGGTGGTGAGGCGCCGCCGGGGCTTGGCCAGCGCTTGAGCCTTGTGTTTCCTGTGCTGGCCTCTTCG                                                                                                                                                                        >  1:1153768/1‑150             AGTGGGCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTTTCGATAGTGGTAATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     <  1:455988/150‑1             AGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     >  1:1587265/1‑150               TGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGT                                                                                                                                                                   >  1:1356282/1‑150               TGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGATGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGCTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCCTCTTCGCGGGT                                                                                                                                                                   >  1:542374/1‑150                  CCGTGATGCTGGTGCTGGGGGTGATGTTCCCGTTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCCTCTTCGCGGGTAAA                                                                                                                                                                <  2:542374/150‑1                  CCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAA                                                                                                                                                                <  1:853592/150‑1                   CGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     >  1:845296/1‑144                   CGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     <  2:845296/144‑1                   CGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTAGATGGTGGAGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGAGGGTAAAC                                                                                                                                                               >  2:44494/1‑150                   CGTGATGATGGTGCTGTGGGTGATGTTTCTGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGTTAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAAC                                                                                                                                                               <  1:1190172/150‑1                    gttATGCTCGGGTTGGGGGTGATTTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACC                                                                                                                                                              <  2:1168528/147‑1                    GTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCCTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACC                                                                                                                                                              <  2:1135914/150‑1                     TGATGCTGGTGCTGGGGGGGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCC                                                                                                                                                             >  1:1443917/1‑150                        TGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCT                                                                                                                                                          <  2:1059635/150‑1                          CTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC                                                                                                                                                        >  1:963258/1‑150                           TGGTGCTGGGGGGGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCGTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCT                                                                                                                                                       >  1:1188989/1‑150                             GTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC                                                                                                                                                     >  1:325906/1‑150                                            TTCCGGGTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGT                                                                                                                                      <  1:473969/150‑1                                            TTCCCGGTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGACGCGAGTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTACCGGCATCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGT                                                                                                                                      <  1:516218/150‑1                                                     GTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGG                                                                                                                             <  2:1356282/150‑1                                                           GTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC                                                                                                                                                        <  1:276831/117‑1                                                           GTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC                                                                                                                                                        >  2:276831/1‑117                                                               CGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                              >  2:1425660/1‑139                                                               CGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGG                                                                                                                              <  1:1425660/139‑1                                                                    GTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCC                                                                                                                      >  1:1160597/1‑142                                                                    GTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCC                                                                                                                      <  2:1160597/142‑1                                                                     TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGT                                                                                                                                      >  1:58446/1‑125                                                                     TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGT                                                                                                                                      <  2:58446/125‑1                                                                     TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCT                                                                                                                                                                           >  2:429038/1‑88                                                                     TGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCT                                                                                                                                                                           <  1:429038/88‑1                                                                         GATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     <  1:830081/90‑1                                                                         GATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     <  2:720293/90‑1                                                                         GATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     >  2:830081/1‑90                                                                         GATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGG                                                                                                                                                                     >  1:720293/1‑90                                                                                                                          AGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                            <  1:240632/82‑1                                                                                                                          AGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGT                                                                                                                            >  2:240632/1‑82                                                                                                                                                            TTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAAGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCAT                      <  2:140742/150‑1                                                                                                                                                              CGCGGGTAAACCCGCTCCTACAACGCGGTCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAACGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCG                    >  2:1153768/1‑150                                                                                                                                                               GCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGA                   <  2:618185/150‑1                                                                                                                                                                 GGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACc                 >  1:173961/1‑149                                                                                                                                                                   GTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACC               <  1:1542222/150‑1                                                                                                                                                                   GTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCAC                                                    <  2:1428077/113‑1                                                                                                                                                                   GTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCAC                                                    >  1:1428077/1‑113                                                                                                                                                                       ACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCA           >  2:1262376/1‑150                                                                                                                                                                        CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACAACACCACCATCGACACCCCCAC          >  1:1301496/1‑150                                                                                                                                                                        CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACAC                                                                                             <  2:576745/67‑1                                                                                                                                                                        CCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACAC                                                                                             >  1:576745/1‑67                                                                                                                                                                         CCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACC         >  1:222136/1‑150                                                                                                                                                                         CCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGA                   <  2:829968/140‑1                                                                                                                                                                         CCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGA                   >  1:829968/1‑140                                                                                                                                                                            CTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGC      <  1:1608132/150‑1                                                                                                                                                                               CTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTCTCCAACCCCCACATCACCACCATCGACACCCCCACCAGCGGG   >  2:1620778/1‑150                                                                                                                                                                               CTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGG   <  2:127278/150‑1                                                                                                                                                                                TACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  >  1:453966/1‑150                                                                                                                                                                                  CAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCA                             <  1:170178/121‑1                                                                                                                                                                                  CAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCA                             >  2:170178/1‑121                                                                                                                                                                                                                                                                                                                                       CTGGAAGGCGGCAGTGGCCGTGATGCTGGTGCTGGGGGTGATGTTCCCGCTGGTGGGGGTGTCGATGGTGGTGATGTGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5506460‑5506637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggtaaacccgctcctacAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAACACAAGGCTCAAGCGCTGGCCAAGACCCGGCGGCGCCTCACCACCAAACTATCCACCCCCCACATCACCACCATCGACACCCCCACCAGCGGGA  <  NC_002947/5506650‑5506504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.