| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5582863 | 50 (0.840) | 2 (0.030) | 4/230 | NT | 4.2% | coding (534/756 nt) | PP_4911 | hypothetical protein |
| ? | NC_002947 | = 5582873 | 44 (0.770) | coding (524/756 nt) | PP_4911 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCACTGCCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5582852‑5582863‑‑‑‑‑‑‑cctcgAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCGCTGCAC < NC_002947/5582873‑5582727 TCACTGCCCTCGTGCTGCTGCTCGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAA < 1:526365/62‑1TCACTGCCCTCGTGCTGCTGCTCGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAA > 2:526365/1‑62 TGCCCTCGTGCTGCTGCTCGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGA > 1:1442275/1‑86 TGCCCTCGTGCTGCTGCTCGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGA < 2:1442275/86‑1 CCTCGAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCGCTGC > 2:1388431/1‑150 CTCGAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCGCTGCA < 1:698864/150‑1 TCGAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCGCTGCAC > 2:390768/1‑150 TCGAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCG > 1:1120129/1‑144 TCGAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCG < 2:1120129/144‑1 TCACTGCCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5582852‑5582863‑‑‑‑‑‑‑cctcgAGCAGCAGCACGAGGGCAGTGAGTCGTCGCAGGTGCAGGCTCAGGGCCAACTGTTGCAGAAGCTGGCCGAACAGCTGAGCACGGCGGTGAAGCCGCTGGCCAACCAGCCGGCGATTGCCGAAGAGGCACCGAAAAAGCCCGCTGCAC < NC_002947/5582873‑5582727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |