New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5828405 = | 57 (0.950) | 5 (0.090) | 5/230 | NT | 8.7% | coding (503/855 nt) | rpoH | RNA polymerase factor sigma‑32 |
? | NC_002947 | 5828441 = | 50 (0.870) | coding (467/855 nt) | rpoH | RNA polymerase factor sigma‑32 |
AACGACGAAGTGCATCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5828454‑5828405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgaTGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATCCAGTGCA > NC_002947/5828441‑5828588 AACGACGAAGTGCATCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGC > 2:1057594/1‑150 AGTGCATCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGG > 1:180759/1‑121 AGTGCATCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGG < 2:180759/121‑1 TCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAG > 1:1514124/1‑121 TCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAG < 2:1514124/121‑1 GCCGCGCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATC < 1:1057594/150‑1 GCGATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATCCAGTG > 1:1543767/1‑150 GATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATCCAGTGCA > 1:1463406/1‑150 GATGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATCCAGTGCA > 2:1373801/1‑150 AACGACGAAGTGCATCGCGTGGCGGAAAGCCTTGGCGTCGAGCCGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5828454‑5828405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgaTGCACTTCGTCGTTGTTCAGCCACGCCAGGCGCTTCTTCTGGCTACGCAGGTTGAAGAACAGCTTGCGCTGAGCCTTGGTGGTAGCCACCTTGACGATGCGCCAGTTGCGCAGAATGAACTCGTGGATCTCTGCCTTGATCCAGTGCA > NC_002947/5828441‑5828588 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |