| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6057504 = | 70 (1.170) | 5 (0.090) | 5/220 | NT | 8.5% | coding (645/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase |
| ? | NC_002947 | 6057542 = | 43 (0.780) | coding (683/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase | |||||
GCCCAGGTTAGCCAGGTATTGCGCCTGCAGGCGCGTGGCCCTGGGCAGTACCGGCGCACGCAGGCTGCGCAGGCTTTCGCGCAGGCGTTGCTGCGACAGCTGATGGGTCAGCAACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6057660‑6057504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccttcgAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAGCAGCGGGTA > NC_002947/6057542‑6057690 GCCCAGGTTAGCCAGGTATTGCGCCTGCAGGCGCGTGGCCCTGGGCAGTACCGGCGCACGCAGGCTGCGCAGGCTTTCGCGCAGGCGTTGCTGCGACAGCTGATGGGTCAGCAACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTG < 2:1454392/150‑1GCCCAGGTTAGCCAGGTATTGCGCCTGCAGGCGCGTGGCCCTGGGCAGTACCGGCGCACGCAGGCTGCGCAGGCTTTCGCGCAGGCGTTGCTGCGACAGCTGATGGGTCAGCAACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTG < 2:332405/150‑1 GTTAGCCAGGTATTGCGCCTGCAGGCGCGTGGCCCTGGGCAGTACCGGCGCACGCAGGCTGCGCAGGCTTTCGCGCAGGCGTTGCTGCGACAGCTGATGGGTCAGCAACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTC > 1:411526/1‑150 AACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCA > 1:696579/1‑139 AACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCA < 2:696579/139‑1 CTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTG > 1:866962/1‑150 CTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTG > 1:1440086/1‑36 CTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTG < 2:1440086/36‑1 GAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGC < 1:63476/101‑1 GAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGC > 2:63476/1‑101 CTGGCCTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAG < 1:1355381/150‑1 CCTTCGAGGAGTTGCGGACCCACCAGCTGTGGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCGTGCAGGCGCAATACCTGGCTAACCTGGGCTTACAGCCGACCGGCGCGCAGCAGC < 2:548903/150‑1 CTTCGAAGAGTTTCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAGCAGCG > 2:954784/1‑150 CTTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAGCAGCG < 1:1384347/150‑1 TTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGC > 2:9727/1‑138 TTCGAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGC < 1:9727/138‑1 GAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAGCAGCGGGTA < 2:1204812/150‑1 GCCCAGGTTAGCCAGGTATTGCGCCTGCAGGCGCGTGGCCCTGGGCAGTACCGGCGCACGCAGGCTGCGCAGGCTTTCGCGCAGGCGTTGCTGCGACAGCTGATGGGTCAGCAACTCTTCGAAGGCCAGGCGGTGTTGAGCCCAGTGCTGGCCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6057660‑6057504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccttcgAAGAGTTGCTGACCCATCAGCTGTCGCAGCAACGCCTGCGCGAAAGCCTGCGCAGCCTGCGTGCGCCGGTACTGCCCAGGGCCACGCGCCTGCAGGCGCAATACCTGGCTAACCTGGGCTTCCAGCCGACCGGCGCGCAGCAGCGGGTA > NC_002947/6057542‑6057690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |