| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6179890 | 56 (0.940) | 6 (0.110) | 6/228 | NT | 10.1% | coding (285/471 nt) | atpF | ATP synthase subunit b |
| ? | NC_002947 | = 6179909 | 54 (0.950) | coding (266/471 nt) | atpF | ATP synthase subunit b | |||||
CGCATGCGCGTTTTGATCGATTGTGGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6179737‑6179890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacg‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCGTTGGTGGTGCTGAAAAGATCCTTGGCGCC < NC_002947/6179909‑6179761 CGCATGCGCGTTTTGATCGATTGTGGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TC > 1:336127/1‑150 ATTGTGGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑A‑AGCCCGTGAACAGG > 1:1146283/1‑150 GGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTTGTCGACG‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AA > 2:200464/1‑150 CACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCG > 1:207492/1‑89 CACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCG < 2:207492/89‑1 ACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AA > 1:1426297/1‑105 ACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AA < 2:1426297/105‑1 CTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑CGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCG > 1:200464/1‑150 AGCCTTCACACGGTCAGCT‑‑TCGACGCG‑AGCCTGTTCACGGGCT‑TCGTCG‑‑AAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCGTTGGT > 2:1146283/1‑150 GACG‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCGTTGGTGGTGCTGAAAAGATCCTTGGC < 1:855378/150‑1 G‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCGTTGGTGGTGCTGAAAAGATCCTTGGCGCC > 2:1493418/1‑150 CGCATGCGCGTTTTGATCGATTGTGGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCT‑‑TCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6179737‑6179890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacg‑A‑AGCCCGTGAACAGGCTCGCGTCG‑‑AAGCTGACCGTGTGAAGGCTCAGGCTCTGGCCGAGATCGAACAGGAACTGAACAGCGCTAAAGACGCCCTGCGTGCCCAAGTGGGTGCTCTGGCCGTTGGTGGTGCTGAAAAGATCCTTGGCGCC < NC_002947/6179909‑6179761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |