New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 452108 =75 (1.250)5 (0.090) 4/226 NT 6.6% coding (23/1281 nt) aruC acetylornithine aminotransferase
?NC_002947 452135 = 71 (1.260)coding (50/1281 nt) aruC acetylornithine aminotransferase

TTACAGCGATGATTCGGTCGATTGTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAAC  >  NC_002947/451959‑452256
                                                                                                                                                     |                                                                                                                                                    
agtgaagtccaggtaggcatgcccttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttggg                                                                                                                                                      >  1:199909‑M1/150‑150 (MQ=255)
 gtgaagtccaggtaggcatgcccttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggc                                                                                                                                                     <  2:166032‑M1/2‑1 (MQ=255)
  aCAGCGATGATTCGGTCGATTGTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCt                                                                                                                                                    <  1:1170039/150‑1 (MQ=255)
   gaagtccaggtaggcatgcccttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggggctcaagcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctc                                                                                                                                                   <  2:1277975‑M1/4‑1 (MQ=255)
     gCGATGATTCGGTCGATTGTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAACATATCGAGTGCGGGCCCCCAGACCGCACCGTGGCTGCCATTTACCGAAATGAGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCgg                                                                                                                                                 >  1:109994/1‑150 (MQ=255)
     agtccaggtaggcatgcccttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcgg                                                                                                                                                 <  2:942203‑M1/6‑1 (MQ=255)
      gtccaggtaggcatgcccttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttgggctcggc                                                                                                                                                <  1:614080‑M1/7‑1 (MQ=255)
        ttgatTCGGTCGATTGTTACCCCGGATGAAAAACACTTTTGATTGGTAAGGCAAAATATCGAGTGCAGGCACCAAGATCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCTGCTc                                                                                                                                              <  2:109994/149‑1 (MQ=255)
                 tCGATTTTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGc                                                                                                                                                <  1:651023/139‑1 (MQ=255)
                 tCGATTTTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGc                                                                                                                                                >  2:651023/1‑139 (MQ=255)
                        ttcgttgtcccacaaccacgagccctggccacgcacgaatacctgcgctgcacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttggGCTCGGCTCCTGCCGCCGCCGCCGa                                                                                                                              >  1:1307729‑M1/126‑150 (MQ=255)
                        ttACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTggcgccgcccgcga                                                                                                                              >  1:623662/1‑145 (MQ=255)
                        ttACCCCGGATGAAAAACACTTTTGATAGGCAAGCAAAAATATCCAGCTGAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGa                                                                                                                              >  1:692553/1‑150 (MQ=255)
                            cccGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGccc                                                                                                                          >  2:257907/1‑150 (MQ=255)
                             ccGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCa                                                                                                                         >  1:49242/1‑150 (MQ=255)
                              cGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCaa                                                                                                                        >  1:1487200/1‑150 (MQ=255)
                                     aaaaCACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCGGCCGCCGCCGAGCCCAAGCGTgcg                                                                                                                 >  1:791485/1‑150 (MQ=255)
                                     aaaaCACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTgcg                                                                                                                 >  1:1497252/1‑150 (MQ=255)
                                       aaCACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGcc                                                                                                               >  1:739820/1‑150 (MQ=255)
                                       aaCACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGcc                                                                                                               >  1:166032/1‑150 (MQ=255)
                                              ttGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATc                                                                                                        <  2:1497252/150‑1 (MQ=255)
                                                 aTAGGCAAGGCAATATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCTCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCGACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGGGATAGTg                                                                                                     >  2:451463/1‑150 (MQ=255)
                                                  tAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTgcgc                                                                                                                <  2:1625171/138‑1 (MQ=255)
                                                  tAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTgcgc                                                                                                                >  1:1625171/1‑138 (MQ=255)
                                                  tAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGc                                                                                                    <  1:254988/150‑1 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCGTTTACCGTGAGTGGTTGGCGCCCTCATGCAGCGGTACAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCCAGCCCAAGCGTGCGCCGGTGCTCGTGCCGc                                                                                                 >  2:522997/1‑150 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGcc                                                                                                                           >  1:1337134/1‑124 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGcc                                                                                                                           <  2:1337134/124‑1 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGAt                                                                                                         >  1:337507/1‑142 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGAt                                                                                                         <  2:337507/142‑1 (MQ=255)
                                                     gcaaggcaaAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGc                                                                                                 >  1:1419205/1‑150 (MQ=255)
                                                               atatCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGa                                                                                       <  1:257907/150‑1 (MQ=255)
                                                                  tCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCa                                                                                    <  2:739820/150‑1 (MQ=255)
                                                                    gAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTg                                                                                                     <  1:1145170/131‑1 (MQ=255)
                                                                    gAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTg                                                                                                     >  2:1145170/1‑131 (MQ=255)
                                                                      gTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTATGCGCAGTCg                                                                                >  2:506122/1‑150 (MQ=255)
                                                                       tGCAGGCACCAAGACCGCACCGTGGCTGCTCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCGACCTGCGCCGCTCGGCTCCTGCAGCCCCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGc                                                                               <  1:451463/150‑1 (MQ=255)
                                                                          cacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttggGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGc                                                                                                                      >  1:828470‑M1/76‑108 (MQ=255)
                                                                          cacgttcggtgccgggcatcaggcgctcaggcgactgctcagacgcgtgcggcacgatcaccggcgcacgcttggGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGc                                                                                                                      <  2:828470‑M1/33‑1 (MQ=255)
                                                                          aGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTgc                                                                                                                  <  1:483832/112‑1 (MQ=255)
                                                                          aGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTgc                                                                                                                  >  2:483832/1‑112 (MQ=255)
                                                                          aGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTg                                                                            >  2:613757/1‑150 (MQ=255)
                                                                            gCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAg                                                                          >  2:1495085/1‑150 (MQ=255)
                                                                                cAAGACCGCACGGTAGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGcc                                                                      >  2:1296204/1‑150 (MQ=255)
                                                                                 aaGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCt                                                                     >  1:740869/1‑150 (MQ=255)
                                                                                 aaGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCt                                                                     >  1:740875/1‑150 (MQ=255)
                                                                                     ccGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATg                                                                 <  2:1338266/150‑1 (MQ=255)
                                                                                         aCCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCg                                                             <  2:692553/150‑1 (MQ=255)
                                                                                                cTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGcc                                                                                                   <  1:48579/105‑1 (MQ=255)
                                                                                                cTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGcc                                                                                                   >  2:48579/1‑105 (MQ=255)
                                                                                                 tGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGaa                                                     >  2:327996/1‑150 (MQ=255)
                                                                                                  gCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAAc                                                    >  2:1176244/1‑150 (MQ=255)
                                                                                                    ccTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGTATGCGGATGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGt                                                  >  1:1413214/1‑150 (MQ=255)
                                                                                                    ccTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGt                                                  <  1:1495085/150‑1 (MQ=255)
                                                                                                         aCCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTTAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAgc                                             >  1:656050/1‑150 (MQ=255)
                                                                                                           cGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGTACGTGCAgcgc                                           >  1:1486874/1‑150 (MQ=255)
                                                                                                            gTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAAGGTGCAgatcg                                          >  1:70032/1‑146 (MQ=255)
                                                                                                            gTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCa                                          <  1:1271595/150‑1 (MQ=255)
                                                                                                             tGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCTCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAg                                         <  2:791485/150‑1 (MQ=255)
                                                                                                             tGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGAt                                                                  >  2:485532/1‑125 (MQ=255)
                                                                                                             tGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGAt                                                                  <  1:485532/125‑1 (MQ=255)
                                                                                                                    ttggAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcg                                  >  1:142124/1‑150 (MQ=255)
                                                                                                                    ttggAGCCCTGATGAACCTGTTCAACCTGCCCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcg                                  >  1:1277975/1‑150 (MQ=255)
                                                                                                                     tggAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcgt                                 <  2:49242/150‑1 (MQ=255)
                                                                                                                     tggAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcgt                                 <  2:397775/150‑1 (MQ=255)
                                                                                                                       gAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcgtgc                               <  1:1080544/150‑1 (MQ=255)
                                                                                                                       gAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcgtgc                               <  2:1487200/150‑1 (MQ=255)
                                                                                                                        gtgcggcacgatcaccggcgcacgcttggGCTCGGCTCCTGCTGCCGCCGCCGAGCCCAAGc                                                                                                                      <  1:1251093‑M1/33‑1 (MQ=255)
                                                                                                                        gtgcggcacgatcaccggcgcacgcttggGCTCGGCTCCTGCTGCCGCCGCCGAGCCCAAGc                                                                                                                      >  2:1251093‑M1/30‑62 (MQ=255)
                                                                                                                          cccTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTcgtgcgtg                            <  2:623662/150‑1 (MQ=255)
                                                                                                                            cTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGc                          >  2:136531/1‑150 (MQ=255)
                                                                                                                             tgatgaACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCt                                                                     >  1:572476/1‑106 (MQ=255)
                                                                                                                             tgatgaACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCt                                                                     <  2:572476/106‑1 (MQ=255)
                                                                                                                             tgatgaACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGcc                         >  1:1189334/1‑150 (MQ=255)
                                                                                                                             tgatgaACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATAGTGGCACACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGcc                         >  1:1433723/1‑150 (MQ=255)
                                                                                                                              gatgaACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCa                        >  2:614080/1‑150 (MQ=255)
                                                                                                                                   aCCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGa                                                                           >  1:375635/1‑94 (MQ=255)
                                                                                                                                   aCCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGa                                                                           <  2:375635/94‑1 (MQ=255)
                                                                                                                                    ccTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCCGCGCCGGCATTCGTTCGTGGCCCTGGCTc                  >  2:93422/1‑150 (MQ=255)
                                                                                                                                     cTGTTCCACCTGCGCCCGTCGGCGCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCg                 >  2:1222372/1‑150 (MQ=255)
                                                                                                                                     cTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCg                 >  2:271028/1‑150 (MQ=255)
                                                                                                                                        ttCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTgg              <  1:136531/150‑1 (MQ=255)
                                                                                                                                            aCCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTtgt          <  2:740869/150‑1 (MQ=255)
                                                                                                                                            aCCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTtgc          <  2:740875/150‑2 (MQ=255)
                                                                                                                                             ccTGCGCCGCGCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGAGCCGGTGATTGTGCCGCACGCGTCGGCGCAGTCGCCTGAGCGCCTGAGGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTtgtg         <  1:522997/150‑1 (MQ=255)
                                                                                                                                              cTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTgg        <  1:1155980/150‑1 (MQ=255)
                                                                                                                                                  gccgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCa                                                                                    <  1:459069/70‑1 (MQ=255)
                                                                                                                                                  gccgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCa                                                                                    >  2:459069/1‑70 (MQ=255)
                                                                                                                                                   ccgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACaa   <  2:858950/150‑1 (MQ=255)
                                                                                                                                                    gGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAAc  <  1:1548707‑M1/149‑1 (MQ=255)
                                                                                                                                                    cgcTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAAc  >  1:942203/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TTACAGCGATGATTCGGTCGATTGTTACCCCGGATGAAAAACACTTTTGATAGGCAAGGCAAAATATCGAGTGCAGGCACCAAGACCGCACCGTGGCTGCCCTTTACCGTGATTGGTTGGAGCCCTGATGAACCTGTTCAACCTGCGCCGCTCGGCTCCTGCCGCCGCCGCCGAGCCCAAGCGTGCGCCGGTGATCGTGCCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAAC  >  NC_002947/451959‑452256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.