| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 669053 = | 50 (0.840) | 8 (0.140) | 7/228 | NT | 14.0% | coding (492/2355 nt) | pbpC | peptidoglycan glycosyltransferase |
| ? | NC_002947 | 669088 = | 51 (0.900) | coding (527/2355 nt) | pbpC | peptidoglycan glycosyltransferase | |||||
TGTGTCGGGCGGCAGCACATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCG > NC_002947/668909‑669202 | cccgggcacgctgggcacgctcggggtggcggtccgggcgcagccggctgggtgcctggggcagcacggccagcagtgccgcttcggcaggtgtcaggtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGaa > 1:1155283‑M1/145‑150 (MQ=255) gtgtCGGGCGGCAGCACATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAAc > 1:1475460/1‑150 (MQ=255) gggCGGCAGCACATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCgcgc > 2:1136829/1‑150 (MQ=255) agcaCATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTc > 2:829319/1‑150 (MQ=255) agcaCATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTc < 2:244246/150‑1 (MQ=255) ttGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCggcggc > 1:1473053/1‑150 (MQ=255) aTGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCtt > 1:970818/1‑150 (MQ=255) gTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGc > 2:978657/1‑150 (MQ=255) gTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGc > 1:1616084/1‑150 (MQ=255) aCGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTAc > 2:553110/1‑109 (MQ=255) aCGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTAc < 1:553110/109‑1 (MQ=255) aCGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTggc > 1:71839/1‑150 (MQ=255) gctCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGAACGCTTGTGGGTGTGGCGGcagc < 2:1222172/150‑1 (MQ=255) ccGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTgg > 2:316223/1‑150 (MQ=255) cACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCtt < 1:1000238/123‑1 (MQ=255) cACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCtt > 2:1000238/1‑123 (MQ=255) gACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGTATCAGGGGGTGGCGGCAGCCAGCTGGGCGTAc > 1:1340383/1‑150 (MQ=255) tggggcagcacggccagcagtgccgcttcggcaggtgtcaggtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCAg > 2:906127‑M1/89‑122 (MQ=255) tggggcagcacggccagcagtgccgcttcggcaggtgtcaggtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCAg < 1:906127‑M1/34‑1 (MQ=255) tACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGc > 2:897938/1‑141 (MQ=255) tACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGc < 1:897938/141‑1 (MQ=255) ccTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCACGTTAGACATACCTGGGCaa > 2:860980/1‑150 (MQ=255) tGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGt < 2:1473053/150‑1 (MQ=255) gTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCg > 2:378693/1‑150 (MQ=255) ggCAAACTGCGCCAGCTATGGCGCCCCAACGAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGccc > 1:1277054/1‑150 (MQ=255) aaaCTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTg > 2:1387401/1‑150 (MQ=255) tGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCAcc > 1:1012288/1‑150 (MQ=255) gcCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGa < 1:378693/150‑1 (MQ=255) gcCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGa < 2:71839/150‑1 (MQ=255) cAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGaca > 2:425514/1‑150 (MQ=255) aGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTCTCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGacac < 1:860980/150‑1 (MQ=255) tGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGcc > 1:739809/1‑150 (MQ=255) tGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGcc < 1:978657/150‑1 (MQ=255) aggtgtcaggtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCa > 2:162559‑M1/57‑89 (MQ=255) aggtgtcaggtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCa < 1:162559‑M1/33‑1 (MQ=255) gcACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAg < 2:1337909/150‑1 (MQ=255) gcACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCCGATACCTGCCGAAg < 1:316223/150‑1 (MQ=255) cTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACcgc < 1:1385924/58‑1 (MQ=255) cTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACcgc > 2:1385924/1‑58 (MQ=255) cTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGc > 1:134778/1‑150 (MQ=255) ttGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCa < 2:1475460/150‑1 (MQ=255) gtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCtt < 1:1417090‑M1/31‑1 (MQ=255) gtgcaggggcgacttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCtt > 2:1417090‑M1/48‑78 (MQ=255) tGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCActgctg > 1:65012/1‑149 (MQ=255) tGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCActgctg < 2:65012/149‑1 (MQ=255) aaTGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCg > 2:630553/1‑150 (MQ=255) ttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCa > 2:1113561‑M1/35‑67 (MQ=255) ttgcccaggtacgcccagctggctgccgccacgcCCTGAACCGCGCACCTTTCGGCGGCACGCTTCa < 1:1113561‑M1/33‑1 (MQ=255) ggCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGtgc < 1:829319/150‑1 (MQ=255) ttGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGccc > 2:1597108/1‑150 (MQ=255) gTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCa > 1:1582148/1‑150 (MQ=255) tCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGGACTGCAGGCCGtcctttgccag < 2:1012288/150‑8 (MQ=255) gcgcGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCAcc > 1:1420293/1‑150 (MQ=255) gcgACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCa < 2:1616084/150‑1 (MQ=255) cgACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAg > 2:600487/1‑150 (MQ=255) aTCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCgg > 1:750485/1‑150 (MQ=255) cTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTg > 1:899768/1‑150 (MQ=255) cTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTg > 1:1642707/1‑150 (MQ=255) tGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTgc > 2:1330672/1‑150 (MQ=255) gATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGt < 1:72267/45‑1 (MQ=255) gATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGt > 2:72267/1‑45 (MQ=255) aTCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCg < 1:1136829/150‑1 (MQ=255) cTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGa < 2:134778/150‑1 (MQ=255) aCCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGAcc < 1:1387401/150‑1 (MQ=255) CCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCAATGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCg < 1:1586936‑M1/150‑1 (MQ=255) | TGTGTCGGGCGGCAGCACATTGTCGATGCAGGTGGCACGGCTGCTCGACCCGCACGACCGTACCCTGGTCGGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCACTGCTGGCCGTGCTGCCCCAGGCACCCAGCCGGCTGCGCCCGGACCG > NC_002947/668909‑669202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |