New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2069216	49 (0.820)	5 (0.090)	5/218	NT	9.9%	intergenic (+20/‑454)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase
	?	NC_002947	= 2069228	47 (0.860)					intergenic (+32/‑442)	PP_t19/PP_1846	tRNA‑Ser/group II intron‑encoding maturase

TTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAA  >  NC_002947/2069068‑2069363                                                                                                                                                     |                                                                                                                                                    ttAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAGGCCCCcgc                                                                                                                                                    >  1:401289/1‑150 (MQ=255)   cgatctccTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTCGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCgcgc                                                                                                                                                  <  1:514667/144‑1 (MQ=255)         ccTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGaaaa                                                                                                                                            <  2:33629/150‑1 (MQ=255)          cTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCCAGGCTTCATATACCCTGTGCGCCACCACATTCTACGAAAAGTCCCCGCGCtagatcg                                                                                                                                           >  2:514667/1‑144 (MQ=255)           tCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGCCCGCGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGt                                                                                                                                          <  1:16752/150‑1 (MQ=255)           tCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACAAAAAGCCCCCGtacttttcagc                                                                                                                                          <  1:319523‑M1/150‑12 (MQ=255)                tctccgcaAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcggg                                                                                                                                     >  1:1585797‑M2/4‑146 (MQ=255)                aGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGtacttttcagcgcggg                                                                                                                                     <  1:757991‑M1/150‑17 (MQ=255)                aGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcggg                                                                                                                                     >  2:916760‑M2/1‑146 (MQ=255)                aGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACCAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcggg                                                                                                                                     <  1:524021‑M2/150‑5 (MQ=255)                     gCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATTTTGGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggggctt                                                                                                                                >  1:101450‑M2/1‑141 (MQ=255)                       aaGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggggctttt                                                                                                                              <  1:734194‑M2/150‑12 (MQ=255)                            ttGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgtgt                                                                                                                         <  1:646579/150‑1 (MQ=255)                              gAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTgc                                                                                                                       >  1:1459325/1‑150 (MQ=255)                               aaGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAGAAGCCCCCGtacttttcagcgcgggggcttttcgtagaat                                                                                                                      <  1:1567437‑M1/150‑32 (MQ=255)                                    aaaCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgtgt                                                                                                                         <  1:946190/142‑1 (MQ=255)                                    aaaCGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTtgtgt                                                                                                                         >  2:946190/1‑142 (MQ=255)                                          tGAAGTGTCCGAGTGGTCGAAGGGGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGgc                                                                                                           >  2:69089/1‑150 (MQ=255)                                                 tCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTgc                                                                                                    <  2:734194/150‑1 (MQ=255)                                                              aGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAAc                                                                                       >  2:975770/1‑150 (MQ=255)                                                              aGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAAc                                                                                       <  1:462435/150‑1 (MQ=255)                                                              aGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAAc                                                                                       <  1:144419/150‑1 (MQ=255)                                                              aGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTCCGCTTACGCGCAAc                                                                                       <  1:1112042/150‑1 (MQ=255)                                                                    aCGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCtt                                                                                 <  1:265239/150‑1 (MQ=255)                                                                    aCGCCTGAAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCtt                                                                                 >  2:1481376/1‑150 (MQ=255)                                                                     cGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGGACTGATGCTTTTTGTGTGCGCCAGGCATGGCGGGTTGCGCTTACGCGCAACgcgccat                                                                                <  2:401289/150‑4 (MQ=255)                                                                         tGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGCtg                                                                            >  2:533061/1‑150 (MQ=255)                                                                           gAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTtgtg                                                                          <  1:975770/150‑1 (MQ=255)                                                                              aGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCCATCCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtggtg                                                                       <  1:1413546/150‑1 (MQ=255)                                                                                    tataCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAg                                                                 <  1:1552518/150‑1 (MQ=255)                                                                                    tataCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAg                                                                 >  2:1552518/1‑150 (MQ=255)                                                                                     ataCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                >  2:1067/1‑150 (MQ=255)                                                                                     ataCGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGt                                                                >  2:1478116/1‑150 (MQ=255)                                                                                        cGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtggtg                                                                       <  2:1646060/140‑1 (MQ=255)                                                                                        cGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTgtggtg                                                                       >  1:1646060/1‑140 (MQ=255)                                                                                        cGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTggg                                                             >  1:809382/1‑150 (MQ=255)                                                                                         gagaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGc                                                                                   >  1:120613/1‑127 (MQ=255)                                                                                         gagaAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGc                                                                                   <  2:120613/127‑1 (MQ=255)                                                                                               tCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTg                                                      <  2:1459325/150‑1 (MQ=255)                                                                                                 gTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATGCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGa                                                    <  1:827856/150‑1 (MQ=255)                                                                                                    tCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTgcgc                                                                                                                     <  1:141444/82‑1 (MQ=255)                                                                                                    tCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTgcgc                                                                                                                     >  2:141444/1‑82 (MQ=255)                                                                                                      aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGtacttttcagcgcgggggcttttcgta                                                                                                                          <  1:374099‑M1/75‑28 (MQ=255)                                                                                                      aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGtacttttcagcgcgggggcttttcgta                                                                                                                          >  2:374099‑M1/1‑48 (MQ=255)                                                                                                      aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTaa                                                                                              >  1:929474/1‑103 (MQ=255)                                                                                                      aaGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTaa                                                                                              <  2:929474/103‑1 (MQ=255)                                                                                                           ttCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAg                                                                                             <  2:63499/99‑1 (MQ=255)                                                                                                           ttCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAg                                                                                             >  1:63499/1‑99 (MQ=255)                                                                                                                aTCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTa                                     <  2:809382/150‑1 (MQ=255)                                                                                                                    cttcttCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAACGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGCCTTGGAGTTGAAAGTCCTCTacaca                                 >  2:296330/1‑150 (MQ=255)                                                                                                                            ccGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCaa                         >  1:657825/1‑150 (MQ=255)                                                                                                                               ccACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAggg                      <  1:1478116/150‑1 (MQ=255)                                                                                                                                   aTTCTACGAAAAGCCCCCGCGCTGAAAAGTAcgggggcttctcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctctt                  <  1:1567437‑M2/150‑120 (MQ=255)                                                                                                                                   aTTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTCGCCAAGTGGGTGACTTAGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAg                  <  2:524021/150‑1 (MQ=255)                                                                                                                                    ttCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAgt                 <  2:657825/150‑1 (MQ=255)                                                                                                                                       tACGAAAAGCCCCCGCGCTGAAAAGTAcgggggcttttcgtagaatgtggcggtgaagaagggatttgaaccctt                                                                                         >  2:374099‑M2/1‑27 (MQ=255)                                                                                                                                       tACGAAAAGCCCCCGCGCTGAAAAGTAcgggggcttttcgtagaatgtggcggtgaagaagggatttgaaccctt                                                                                         <  1:374099‑M2/75‑49 (MQ=255)                                                                                                                                       tACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGATTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGtt              >  1:1483208/1‑150 (MQ=255)                                                                                                                                          gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                       <  1:1193147/138‑1 (MQ=255)                                                                                                                                          gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAgg                       >  2:1193147/1‑138 (MQ=255)                                                                                                                                          gAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGc           >  2:1098408/1‑150 (MQ=255)                                                                                                                                           aaaaGCCCCCGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagcctt          <  1:734194‑M1/150‑140 (MQ=255)                                                                                                                                            aaaGCACCGCCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCg         <  1:69089/150‑1 (MQ=255)                                                                                                                                             aaGCCCCCGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttccaaaatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgc        >  1:101450‑M1/1‑9 (MQ=255)                                                                                                                                              aGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGa       <  2:844705/150‑1 (MQ=255)                                                                                                                                               gCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                             <  1:50977/111‑1 (MQ=255)                                                                                                                                               gCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGaaa                                             >  2:50977/1‑111 (MQ=255)                                                                                                                                                 ccccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                            <  2:568762/94‑1 (MQ=255)                                                                                                                                                 ccccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGt                                                            >  1:568762/1‑94 (MQ=255)                                                                                                                                                  cccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctggtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggcct   <  1:524021‑M1/150‑147 (MQ=255)                                                                                                                                                  cccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggcct   >  2:916760‑M1/1‑4 (MQ=255)                                                                                                                                                  cccGtacttttcagcgcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggaga   >  1:1585797‑M1/1‑4 (MQ=255)                                                                                                                                                  cccGCGCTGAAAAGTAcgggggcttttcgtagaatgtggcggtgaagaagggatttgaacccttgatacgatttctcgtatacacactttccaggcgtgctccttcgaccactcggacacttcaccgtttctcttcaagccttgcggcct   <  1:757991‑M2/150‑135 (MQ=255)                                                                                                                                                   ccGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCaa  >  2:426532/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TTAGCGCACCTCGACAGGCCGCAAGGCTTGAAGAGAAACGGTGAAGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGAGAAATCGTATCAAGGGTTCAAATCCCTTCTTCACCGCCACATTCTACGAAAAGCCCCCGCGCTGAAAAGTACGGGGGCTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAA  >  NC_002947/2069068‑2069363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.