New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2301552	61 (1.020)	5 (0.090)	5/212	NT	8.5%	intergenic (‑153/‑178)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	= 2301609	54 (1.020)					intergenic (‑210/‑121)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

TTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAC  >  NC_002947/2301410‑2301701                                                                                                                                               |                                                                                                                                                      ttGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                                <  1:941921/150‑1 (MQ=255)    gtgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                             <  1:258585/150‑1 (MQ=255)    gtgtCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                                             <  2:1454736/150‑1 (MQ=255)            tCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTAATGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCAAAGAATCCaa                                                                                                                                     <  2:881098/150‑1 (MQ=255)                gCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGTCTTTATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcgcg                                                                                                                                 >  1:935551/1‑150 (MQ=255)                gCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcgcg                                                                                                                                 <  2:1409615/150‑1 (MQ=255)                  aaGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGt                                                                                                                               <  2:128628/150‑1 (MQ=255)                    gCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGc                                                                                                                             >  1:604477/1‑150 (MQ=255)                      ggggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgc                                                                                                                           >  1:332707‑M1/1‑122 (MQ=255)                       ggggAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATg                                                                                                                          >  2:1510686/1‑150 (MQ=255)                       gggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATg                                                                                                                          <  1:1285584/150‑1 (MQ=255)                        ggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATgg                                                                                                                         >  2:1209531/1‑150 (MQ=255)                        ggAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATgg                                                                                                                         <  1:930246/150‑1 (MQ=255)                         gAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGc                                                                                                                        >  1:1538845/1‑150 (MQ=255)                              ggCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCgg                                                                                                                   <  1:654894/150‑1 (MQ=255)                              ggCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCgg                                                                                                                   >  2:654894/1‑150 (MQ=255)                                   tATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGt                                                                                                                                                      >  2:609643/1‑110 (MQ=255)                                   tATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGt                                                                                                                                                      <  1:609643/110‑1 (MQ=255)                                   tATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcg                                                                                                              >  1:449990/1‑150 (MQ=255)                                      ggcaaCCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCg                                                                                                           >  1:1642227/4‑150 (MQ=255)                                       gTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCgg                                                                                                          <  2:604477/150‑1 (MQ=255)                                            ccAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttc                                                                                                     >  2:660103‑M1/1‑100 (MQ=255)                                                gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgg                                                                                                 <  2:332707‑M1/150‑55 (MQ=255)                                                gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                 <  1:1209531/150‑1 (MQ=255)                                                gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                 >  2:687963/1‑150 (MQ=255)                                                gCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCgg                                                                                                 <  1:963555/150‑1 (MQ=255)                                                  gTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgc                                                                                               >  1:437158/1‑150 (MQ=255)                                                  gTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgc                                                                                               <  1:1510686/150‑1 (MQ=255)                                                    gaggccGCGGCGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCTCTTACGGATTTAGCAGGGACCCTGTGGGAGCGGGCGcgcgcgcgaacaccggcgcaggcggtgccacgcaccgcgttggattcttcgcgggcac                                                                                             <  1:299029‑M1/148‑59 (MQ=255)                                                      ggCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgc                                                                                           <  2:93577‑M2/150‑4 (MQ=255)                                                          gCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgc                                                                                       <  2:1296886‑M2/150‑8 (MQ=255)                                                               gCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctccca                                                                                  <  1:660103‑M1/150‑70 (MQ=255)                                                                ttgccCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgctccc                                                                                   >  1:1098742‑M2/3‑137 (MQ=255)                                                                ttgccCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgctccc                                                                                   <  2:1098742‑M2/146‑12 (MQ=255)                                                                       aTCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGAcc                                                                          <  1:866997/150‑1 (MQ=255)                                                                        tCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCa                                                                         >  2:643802/1‑150 (MQ=255)                                                                                aaGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcc                                                                                          <  1:1246085‑M2/125‑5 (MQ=255)                                                                                aaGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcc                                                                                          >  2:1246085‑M2/1‑121 (MQ=255)                                                                                    cAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGc                                                             <  1:687963/150‑1 (MQ=255)                                                                                     aGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTcgcg                                                                                                  <  2:454630/112‑1 (MQ=255)                                                                                     aGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTcgcg                                                                                                  >  1:454630/1‑112 (MQ=255)                                                                                       ctctCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtt                                                          <  1:1528269/150‑1 (MQ=255)                                                                                        tctcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCgg                                                                                                          >  2:155348/1‑101 (MQ=255)                                                                                        tctcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCgg                                                                                                          <  1:155348/101‑1 (MQ=255)                                                                                            aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                     >  2:642866/1‑150 (MQ=255)                                                                                            aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                     >  1:644140/1‑150 (MQ=255)                                                                                              aGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCTGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCa                                                   <  1:93577/150‑1 (MQ=255)                                                                                               gAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAg                                                  <  2:642757/150‑1 (MQ=255)                                                                                                 aCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                <  2:849903/150‑1 (MQ=255)                                                                                                 aCTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGtt                                                <  2:1538845/150‑1 (MQ=255)                                                                                                     cgcATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGtct                                            >  2:1632792/1‑150 (MQ=255)                                                                                                       cATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGa                                                                            >  1:1079504/1‑116 (MQ=255)                                                                                                       cATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGa                                                                            <  2:1079504/116‑1 (MQ=255)                                                                                                         tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGACTTGAACGCGGTGCGTGGCACCGGCTGCTCCGGTGTCCGCGGGTGCGCTCGGTCCCAAATAGAGCACGCTTGCCTGGCATTTCTGTCAGTTTTCTCGcc                                        >  2:568400/1‑150 (MQ=21)                                                                                                         tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCTCCCGTTCCCACATGGATCGCGATTGTGTTGCGCTTTTCTCATTTGTCTCGcc                                        <  2:1426207/150‑1 (MQ=18)                                                                                                           aCTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgctcccaca                                                                                <  2:1525963‑M2/108‑15 (MQ=255)                                                                                                           aCTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgctcccaca                                                                                >  1:1525963‑M2/1‑94 (MQ=255)                                                                                                           aCTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGt                                      <  1:643802/150‑1 (MQ=255)                                                                                                            cTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGtt                                     <  2:449990/150‑1 (MQ=255)                                                                                                             ttACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCTGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTg                                    >  2:307681/1‑150 (MQ=255)                                                                                                             ttACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTg                                    >  2:1483/1‑150 (MQ=255)                                                                                                                cTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                                 <  1:1483/150‑1 (MQ=255)                                                                                                                 tGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTg                                <  2:1425945/150‑1 (MQ=255)                                                                                                                  gATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCGCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgc                               <  2:437158/150‑1 (MQ=255)                                                                                                                     ttAGCATGGGCCCTGTGGGAGCCTGCATACCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTGCGCGGCCGAGTCCGCTCCCACATTGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggc                            <  2:322041/150‑1 (MQ=25)                                                                                                                     ttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggc                            <  2:644140/150‑1 (MQ=255)                                                                                                                       aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGcggcgg                          >  1:348929/1‑150 (MQ=255)                                                                                                                          aGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGtaa                       >  2:671235/1‑150 (MQ=255)                                                                                                                            ggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCt                                                                                                                 >  2:279752/1‑58 (MQ=255)                                                                                                                            ggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCt                                                                                                                 <  1:279752/58‑1 (MQ=255)                                                                                                                              aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAtt                   <  1:1296886/150‑1 (MQ=255)                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGAcc                                                                          >  2:834312/1‑93 (MQ=255)                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGAcc                                                                          <  1:834312/93‑1 (MQ=255)                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt                 >  2:1367348/1‑150 (MQ=255)                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt                 <  1:642866/150‑1 (MQ=255)                                                                                                                                 cTGTGCGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgtg                <  2:348929/150‑1 (MQ=255)                                                                                                                                  tgtgGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagt                                                         <  2:1525963‑M1/108‑95 (MQ=255)                                                                                                                                  tgtgGGAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagt                                                         >  1:1525963‑M1/1‑14 (MQ=255)                                                                                                                                    tgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGcgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggccgc             <  1:660103‑M2/150‑82 (MQ=255)                                                                                                                                     gggAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggcaa              <  2:1098742‑M1/148‑138 (MQ=255)                                                                                                                                     gggAGCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggcaa              >  1:1098742‑M1/1‑11 (MQ=255)                                                                                                                                         gCGGGCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggccgcacagc        <  2:1296886‑M1/150‑144 (MQ=255)                                                                                                                                            ggCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggctt                              >  2:1246085‑M1/1‑4 (MQ=255)                                                                                                                                            ggCGcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggctt                              <  1:1246085‑M1/125‑122 (MQ=255)                                                                                                                                             gcgcgcccgcgaacaccggcgcagccggtgccatgcaccgcgttggattcttcgcgggcacgcccgctcccacagggtccctgctaaatcagtaagtgatgcgcagttctatgagagctggcttgcccgcgatcgggccgcacagcggcc    <  2:93577‑M1/150‑148 (MQ=255)                                                                                                                                               gTGCCCGCGAAGAATCCAACGCGGTGCGTGGCACCGCCTGCGCCGGTGTTCGCGCGCGcgcccgctcccacagggtccctgctaaatccgtaagagatgcgcagttctatgagagctggcttgcccgcgatcgggccgcgccgcggcctc  <  1:299029‑M2/150‑93 (MQ=255)                                                                                                                                               gTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAc  <  1:1632792/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                      TTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAC  >  NC_002947/2301410‑2301701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.