New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2466618 = | 50 (0.840) | 3 (0.050) | 3/238 | NT | 5.4% | coding (61/528 nt) | PP_2159 | plastocyanin/azurin family copper‑binding protein |
? | NC_002947 | 2466655 = | 55 (0.930) | coding (98/528 nt) | PP_2159 | plastocyanin/azurin family copper‑binding protein |
GCTGACAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGCTTCTTGCTGGTCAACGAGGGC > NC_002947/2466469‑2466767 | gCTGACAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGcc > 2:1200230/1‑150 (MQ=255) gCTGACAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGcc < 1:1200230/150‑1 (MQ=255) tGACAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAg < 2:1110032/150‑1 (MQ=255) aCAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGgc < 2:57786/150‑1 (MQ=255) aaaGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGgcgc > 1:771364/1‑150 (MQ=255) aaaGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGgcgc > 1:547264/1‑150 (MQ=255) aaaGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGATAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGgcgc > 2:1191671/1‑150 (MQ=255) aaGTTGTAATGTGCCTGTCAGGTAGCCGCCAGTCGCCCCCGGGTAATCTGGCCTCATCCTGCTGTGTATTCCCGGAGGCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGTCAGCCTGC‑CGGCTTTC‑GCTGGCCCCGCGCa < 2:816189/150‑1 (MQ=255) ccTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCttt > 1:1338701/1‑150 (MQ=255) cTGTCAGGTAGCTGCCAGTCGCCCCAGCGTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTg < 2:616252/150‑1 (MQ=255) tCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTggag > 1:616252/1‑148 (MQ=255) tGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGCCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGccc > 2:637624/1‑150 (MQ=255) ccctcgttgaccagcaagaagcgcaccgtctcgccggcttttacctgcaggctttttggctcgaaggcgatgtccttgagcaccacgttgaccgtacgggtggccttggccgCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCcggc > 2:284697‑M1/113‑150 (MQ=255) cccGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAg > 2:207166/1‑150 (MQ=255) tgtgGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGt > 2:1611522/1‑150 (MQ=255) gCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACTGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACgg > 2:401409/1‑150 (MQ=255) tgctgTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACgtgg > 2:26821/1‑150 (MQ=255) tgctgTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACgtgg < 2:491383/150‑1 (MQ=255) gctgTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCa < 1:212467/131‑1 (MQ=255) gctgTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCa > 2:212467/1‑131 (MQ=255) ctgTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACgtggtg > 1:1390906/1‑150 (MQ=255) tATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGACCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCaa < 1:1425354/150‑1 (MQ=255) ttCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGCGCAGGATGCTTGGAAACCTGCAGG‑‑ATGCGCAGAGCGTCGCCTTTGGCGCGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAgg < 1:1191671/150‑1 (MQ=255) ccGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAg < 2:852437/116‑1 (MQ=255) ccGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAg > 1:852437/1‑116 (MQ=255) ccGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACa > 2:737966/1‑150 (MQ=255) ggAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATc < 1:207166/150‑1 (MQ=255) atcatGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTc > 1:1200147/1‑150 (MQ=255) tcatGAAACACCTGTTCATTCCCGGCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCCTGCCATCCGCAGAGATCCACATCTTGCCAACGTGCCCCGGCGGCCAACGCCACCCGTACCGCCAACGTGGTGCTCAAGGCCATCGCCTTcc > 2:186153/1‑149 (MQ=255) tcatGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCg > 1:663199/1‑150 (MQ=255) catGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCGGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGa < 2:547264/150‑1 (MQ=255) catGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGa < 2:1390906/150‑1 (MQ=255) catGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGa < 1:1611522/150‑1 (MQ=255) atGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAg < 2:1549393/150‑1 (MQ=255) tGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGc > 2:593895/1‑150 (MQ=255) gAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGcc > 2:1322606/1‑150 (MQ=255) acCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACAAGCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCaaaaa > 1:428731/1‑150 (MQ=255) tGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGcc < 2:1338701/150‑1 (MQ=255) gTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTc > 1:823987/1‑136 (MQ=255) gTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTc < 2:823987/136‑1 (MQ=255) gTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCt > 2:1175055/1‑150 (MQ=255) ttACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAg < 2:1380648/149‑1 (MQ=255) ttACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAg > 1:1380648/1‑149 (MQ=255) ccGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAg > 2:1048412/1‑86 (MQ=255) ccGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAg < 1:1048412/86‑1 (MQ=255) gCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTaaaa < 1:737966/150‑1 (MQ=255) ccACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAgg < 2:1480032/114‑1 (MQ=255) ccACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAgg > 1:1480032/1‑114 (MQ=255) ccTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTa > 1:547899/1‑89 (MQ=255) ccTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCAGCGGCCAAGGCCACCCGTa < 2:547899/89‑1 (MQ=255) cTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGCGATCGCCTTCGAGCCAAAAAGCCTGCATGTGAAAGCCGGc > 1:491201/1‑150 (MQ=255) cacgttgaccgtacgggtggccttggccgCAGGCGCAGAGCTTCGCCTTTGGCGAGc < 1:1080462‑M1/28‑1 (MQ=255) cacgttgaccgtacgggtggccttggccgCAGGCGCAGAGCTTCGCCTTTGGCGAGc > 2:1080462‑M1/30‑57 (MQ=255) aGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTgcgc < 2:771364/150‑1 (MQ=255) gCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGct < 1:593895/150‑1 (MQ=255) tGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGcttct > 2:600671/1‑150 (MQ=255) tttC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGCTTCTTGCTGGt > 1:158028/1‑150 (MQ=255) CAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGCTTCTTGCTGGTCAACGAGGGc < 2:978430‑M1/150‑1 (MQ=255) | GCTGACAAAGTTGTAATGTGCCTGTCAGGTAGCTGCCAGTCGCCCCCGGCTAATGTGGCCTCATCCTGCTGTGTATTCCCGGAGTCATCATGAAACACCTGTTCATTACCGCCACCCTTGCCCTGGGCAGCCTGC‑CGGCTTTC‑GCTGGCCAGGCGCAGAGCTTCGCCTTTGGCGAGCCTGCCCCGGCGGCCAAGGCCACCCGTACGGTCAACGTGGTGCTCAAGGACATCGCCTTCGAGCCAAAAAGCCTGCAGGTAAAAGCCGGCGAGACGGTGCGCTTCTTGCTGGTCAACGAGGGC > NC_002947/2466469‑2466767 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |