New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4266591	48 (0.800)	5 (0.100)	5/206	NT	9.0%	intergenic (‑89/+57)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein
	?	NC_002947	= 4266628	60 (1.170)					intergenic (‑126/+20)	PP_3738/galP‑IV	transcriptional regulator VanR/porin‑like protein

GCCTGAAGCGATCATCTTGCGCAACGCAACCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGA  >  NC_002947/4266446‑4266736                                                                                                                                                  |                                                                                                                                                  gCCTGAAGCGATCATCTTGCGCAACGCAACCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAATACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGCTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAg                                                                                                                                               <  2:643845/150‑1 (MQ=255)                acaacgcaacgcaaCCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATg                                                                                                                                >  2:673732/5‑150 (MQ=255)                  tGCGCAACGCAACCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGc                                                                                                                              <  2:1013/150‑1 (MQ=255)                     gcaacgcaacCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCAAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGATCACGCGCGAAGCAGGCAACGCGGGTCATGTCAcc                                                                                                                           >  1:342541/1‑150 (MQ=255)                            aacCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAcaccggcgcagccggtgccatgttccgcgtt                                                                                                                    >  1:1345282‑M1/1‑119 (MQ=255)                              ccAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGcc                                                                                                                  >  2:362005/1‑150 (MQ=255)                                         tGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAcaccgtcgcagccggtgccatgttccgcgttgcctgcttcgcgg                                                                                                       <  1:574284‑M1/150‑45 (MQ=255)                                          gACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGGCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcggg                                                                                                      >  1:625881‑M2/1‑142 (MQ=255)                                          gACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAcaccggcgcagccggtgccatgttccgcgttgcctgcttcgcggg                                                                                                      <  2:1345282‑M1/150‑46 (MQ=255)                                          gACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcggg                                                                                                      <  1:632243‑M2/150‑9 (MQ=255)                                                      tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                          >  1:1457485/1‑150 (MQ=255)                                                      tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                          >  1:703513/1‑150 (MQ=255)                                                      tCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGcccc                                                                                          >  2:1378659/1‑150 (MQ=255)                                                        aTCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTa                                                                                        >  1:687547/1‑150 (MQ=255)                                                         tCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTAc                                                                                       >  1:1285012/1‑150 (MQ=255)                                                          ccAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACa                                                                                      <  2:1285012/150‑1 (MQ=255)                                                            aGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCGGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAg                                                                                    >  2:432861/1‑150 (MQ=255)                                                                      cAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGAt                                                                          >  2:1518575/1‑150 (MQ=255)                                                                      cAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTAGCGGGTGAACCCGCCCCTACAAGGTCAGCGGAt                                                                          >  1:1339161/1‑150 (MQ=255)                                                                        aaGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAg                                                                        >  1:184469/1‑150 (MQ=255)                                                                        aaGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAg                                                                        <  2:703513/150‑1 (MQ=255)                                                                            cATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGa                                                                    <  2:1339161/150‑1 (MQ=255)                                                                             aTGAGCGGGCATCTTAGCGCAAGCCGAGGGGGTGCTGCAGGCCTGTTGTAGGAGCTGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGTTGTGCCCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                   >  2:1177320/1‑150 (MQ=39)                                                                                  cGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCa                                                              <  2:1433961/150‑1 (MQ=255)                                                                                    ggCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAgg                                                            <  1:911068/150‑1 (MQ=255)                                                                                            aGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTg                                                    <  2:687547/150‑1 (MQ=255)                                                                                              aacAAGGCGAGGTGCGGCGGCATGCCTGTTGGAGCAGAGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCAGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAATGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGt                                                  <  2:675727/148‑1 (MQ=25)                                                                                                cAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCg                                                >  1:868901/1‑150 (MQ=255)                                                                                                      gAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGgcgc                                                         <  1:1445438/135‑1 (MQ=255)                                                                                                      gAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGgcgc                                                         >  2:1445438/1‑135 (MQ=255)                                                                                                         gggTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                       <  1:1378659/150‑1 (MQ=255)                                                                                                          ggTTGCTGCAGGCCTGTTGTAGGACCGAGTTCGCCCACGAAGCAGACAACGCGGAACATGCCCCTTGTCTCGACGCTGTTCGCGGGTGACCCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGt                                      <  1:1518575/150‑1 (MQ=255)                                                                                                           gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                       <  1:1056855/148‑1 (MQ=255)                                                                                                           gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTg                                       >  2:1056855/1‑148 (MQ=255)                                                                                                           gTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGtt                                     <  2:184469/150‑1 (MQ=255)                                                                                                            ttGCTGCAGGCCTGTTGTAGGGGCGGGTTCACCCGCGAAcaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggt                                                                                                     <  1:1014130‑M1/85‑47 (MQ=255)                                                                                                            ttGCTGCAGGCCTGTTGTAGGGGCGGGTTCACCCGCGAAcaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggt                                                                                                     >  2:1014130‑M1/1‑39 (MQ=255)                                                                                                            ttGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTg                                    >  2:806035/1‑150 (MQ=255)                                                                                                              gctgcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGaa                                  <  1:1337815/150‑1 (MQ=255)                                                                                                               ctgcAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGACCCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAg                                 <  1:508775/150‑1 (MQ=255)                                                                                                                   aGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTgc                             >  2:1176231/1‑150 (MQ=255)                                                                                                                     gCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTgcgc                           <  1:362005/150‑1 (MQ=255)                                                                                                                        tgttgtAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCgg                        >  2:1441263/1‑150 (MQ=255)                                                                                                                               ggAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTcg                 >  2:479663/1‑150 (MQ=255)                                                                                                                                  gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                   >  1:926061/1‑97 (MQ=255)                                                                                                                                  gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGAc                                                                   <  2:926061/97‑1 (MQ=255)                                                                                                                                  gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCt                                                     <  2:1596560/111‑1 (MQ=255)                                                                                                                                  gCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCt                                                     >  1:1596560/1‑111 (MQ=255)                                                                                                                                     ggTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCgttgt           <  1:673732/150‑1 (MQ=255)                                                                                                                                      gTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCgttgtt          >  1:623319/1‑150 (MQ=255)                                                                                                                                       ttCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTc         >  1:970542/1‑150 (MQ=255)                                                                                                                                          aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgcccctacaacaggcctgcagcaa                                                                       <  1:1014130‑M2/85‑40 (MQ=255)                                                                                                                                          aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgcccctacaacaggcctgcagcaa                                                                       >  2:1014130‑M2/1‑46 (MQ=255)                                                                                                                                          aCCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGGGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGc      >  1:1549638/1‑150 (MQ=255)                                                                                                                                           cccGCGAAcaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtc     <  1:632243‑M1/150‑143 (MQ=255)                                                                                                                                           cccGCGAAcaccggcgcagccggtgccatgttccgcgttgcctgcttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcgccttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtc     >  1:625881‑M1/1‑8 (MQ=255)                                                                                                                                           cccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtc     <  2:1345282‑M2/150‑106 (MQ=255)                                                                                                                                           cccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGcc     <  2:1457485/150‑1 (MQ=255)                                                                                                                                            ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCGGGCCCTACAAGGTCAGCGGATAGCTGACGACCAGGCGAATCTGGACGAGCTCACTGTTGAAGCTGCCCCGGTTGGTCGCGTTGTTCAGccc    >  2:179179/1‑149 (MQ=38)                                                                                                                                            ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCg    >  1:637691/1‑150 (MQ=255)                                                                                                                                            ccGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGACGGTGttcgcgggtgaacccgctcctacaacaggcctgcagcaacccctcggcttgcgctaagatgcccgctcatgtctttggaagtcgcctggatgagcaaacccggtca    <  1:574284‑M2/150‑107 (MQ=255)                                                                                                                                             cgcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCgg   >  1:1223749/1‑150 (MQ=255)                                                                                                                                              gcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGa  <  1:806035/150‑1 (MQ=255)                                                                                                                                              gcgAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGa  >  2:1074593/1‑150 (MQ=255)                                                                                                                                                gAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGt                                                                                                             >  2:1615604‑M2/1‑40 (MQ=255)                                                                                                                                                gAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGt                                                                                                             <  1:1615604‑M2/41‑2 (MQ=255)                                                                                                                                                  acaccggcgcagccggtgccatgttccgcgttgcctgcttc                                                                                                           <  1:1615604‑M1/41‑41 (MQ=255)                                                                                                                                                  acaccggcgcagccggtgccatgttccgcgttgcctgcttc                                                                                                           >  2:1615604‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  GCCTGAAGCGATCATCTTGCGCAACGCAACCAGCACCATCTGACCGGGTTTGCTCATCCAGGCGACTTCCAAAGACATGAGCGGGCATCTTAGCGCAAGCCGAGGGGTTGCTGCAGGCCTGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAACGCGGAACATGGCACCGGCTGCGCCGGTGTTCGCGGGTGAACCCGCCCCTACAAGGTCAGCGGATAGCTGACGATCAGGCGCGTCTGGTCGAGATCACTGTTGAAGCTGCGCCGGTTGGTCGCGTTGTTCAGCCGGA  >  NC_002947/4266446‑4266736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.