New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5873252 = | 48 (0.800) | 4 (0.070) | 4/226 | NT | 7.3% | intergenic (‑42/‑100) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase |
? | NC_002947 | 5873287 = | 56 (0.990) | intergenic (‑77/‑65) | rppH/PP_5147 | RNA pyrophosphohydrolase/haloacid dehalogenase‑like family hydrolase |
GGGAATTGCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGAC > NC_002947/5873104‑5873399 | cgctcgcaaagatagtcaccccaggcatggtcgctgtcgccaccgaggagggtattgtccaggtcgaataaagccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacataa > 1:1176861‑M1/149‑150 (MQ=255) gcaaagatagtcaccccaggcatggtcgctgtcgccaccgaggagggtattgtccaggtcgaataaagccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacatAAGCTTg < 1:1216586‑M1/7‑1 (MQ=255) gCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCg > 2:1398741/1‑150 (MQ=255) tGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAAc < 1:1398741/150‑1 (MQ=255) gTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAAcgc > 1:1064850/1‑150 (MQ=255) tCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGcgcccg > 2:410019/1‑150 (MQ=255) gAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGc < 2:738611/150‑1 (MQ=255) cccATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTa < 2:57820/150‑1 (MQ=255) ccATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAt < 2:898851/150‑1 (MQ=255) tAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAtgtg < 2:1588221/150‑1 (MQ=255) cACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAAAACAGAAGACGTACACGAGGGTATTGTTTGACTAAGATTGGGCGTGCACCAATGCGCCTGCCAAGCTTATGTGCAg > 1:1264694/1‑150 (MQ=255) accgaggagggtattgtccaggtcgaataaagccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacatAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAtg < 2:936623‑M1/38‑1 (MQ=255) accgaggagggtattgtccaggtcgaataaagccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacatAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAtg > 1:936623‑M1/108‑145 (MQ=255) cccTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTCGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGc < 2:945277/149‑1 (MQ=255) aCCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTa < 2:206853/142‑1 (MQ=255) aCCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTa > 1:206853/1‑142 (MQ=255) ccGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTg > 1:1430487/1‑150 (MQ=255) atcatTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAAc > 1:795418/1‑150 (MQ=255) ttCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGTAGCTGCGTGAAAACTCCg > 1:1509223/1‑150 (MQ=255) ttCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCg > 2:116033/1‑150 (MQ=255) gTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACCAAGATTGGGAGGGCCGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTAt > 1:1186356/1‑150 (MQ=255) gTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTAt > 2:945139/1‑150 (MQ=255) aaTGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAt < 2:779082/120‑1 (MQ=255) aaTGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTAt > 1:779082/1‑120 (MQ=255) gccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacatAAGCTTGCGAGCGCAGCAACGCGCCCGCCaa < 1:1401744‑M1/31‑1 (MQ=255) gccaggcgcatcgcggtcactcgcatcagccacagggtaggcccgcagaatacggagttttcacgcagctgcacatAAGCTTGCGAGCGCAGCAACGCGCCCGCCaa > 2:1401744‑M1/77‑107 (MQ=255) gACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTAcc < 1:410019/150‑1 (MQ=255) aTTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCtg < 2:988099/150‑1 (MQ=255) ttGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCtgt > 2:539916/1‑150 (MQ=255) tGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCtgtg < 2:538664/150‑1 (MQ=255) tGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCtgtg < 1:945139/150‑1 (MQ=255) gCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTg > 1:196958/1‑150 (MQ=255) aCCATCCGGGTCGATCACGACAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGa > 2:101704/1‑150 (MQ=255) ccATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGTGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAg > 1:214239/1‑150 (MQ=255) cATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGc > 1:785936/1‑128 (MQ=255) cATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGc < 2:785936/128‑1 (MQ=255) gATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATg > 1:963222/1‑150 (MQ=255) aTCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATgc > 2:1367278/1‑150 (MQ=255) aCGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGcc > 2:115293/1‑150 (MQ=255) cTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTc > 1:1462928/1‑150 (MQ=255) tCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCg > 2:1216586/1‑150 (MQ=255) gCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGAc < 2:196958/150‑1 (MQ=255) cAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAACACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGAcc < 1:115293/150‑1 (MQ=255) cGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGa < 2:1430487/150‑1 (MQ=255) gCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCGGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGAc > 1:1333323/1‑150 (MQ=255) aTGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGc > 2:1351083/1‑110 (MQ=255) aTGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGc < 1:1351083/110‑1 (MQ=255) tGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCg < 2:61296/88‑1 (MQ=255) tGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCg > 1:61296/1‑88 (MQ=255) aCGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTc > 2:1504784/1‑133 (MQ=255) aCGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTc < 1:1504784/133‑1 (MQ=255) aTTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCctcctc < 2:1283470/150‑1 (MQ=255) ttCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTg < 2:1064850/150‑1 (MQ=255) tCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTgg < 1:539916/150‑1 (MQ=255) cacaAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTAc < 2:1210352/79‑1 (MQ=255) cacaAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTAc > 1:1210352/1‑79 (MQ=255) acaAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACACTACCGTCGTGGGTGGGGa > 2:1319700/1‑150 (MQ=255) caAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGAc > 1:9988/1‑150 (MQ=255) aaaGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTa < 1:329914/62‑1 (MQ=255) aaaGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTa > 2:329914/1‑62 (MQ=255) | GGGAATTGCCAGGCATCCTGGTTGATCCGTCGAGCCCATAGCACCTGCCCGGCATCATTCGTGAGAATGATCCCGACATTGGGGCGAAAACCATCCGGGTCGATCACGGCAGCAACCTCGCAAACGCATGTCAACGCATTGTTCCACAAAGCTTGCGAGCGCAGCAACGCGCCCGCCAAGCTTATGTGCAGCTGCGTGAAAACTCCGTATTCTGCGGGCCTACCCTGTGGCTGATGCGAGTGACCGCGATGCGCCTGGCTTTATTCGACCTGGACAATACCCTCCTCGGTGGCGAC > NC_002947/5873104‑5873399 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |