New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6000959 =	64 (1.070)	3 (0.070)	3/180	NT	7.1%	intergenic (+10/+99)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase
	?	NC_002947	6001053 =	31 (0.690)					intergenic (+104/+5)	PP_5256/amaA	cyclic nucleotide‑binding protein/L‑pipecolate oxidase

CTGTTTGCAGCAGCGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGA  >  NC_002947/6000811‑6001108                                                                                                                                                     |                                                                                                                                                      tcctgctcaagggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactgg                                                                                                                                                      >  2:745508‑M1/149‑150 (MQ=255)  tGTTTGCAGCAGCGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGc                                                                                                                                                     <  1:1367997/150‑1 (MQ=255)  tGTTTGCAGCAGCGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGc                                                                                                                                                     <  1:938680/150‑1 (MQ=255)  cctgctcaagggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGc                                                                                                                                                     <  1:6449‑M1/3‑1 (MQ=255)   ctgctcaagggcgaggcggatagcctgccgatcccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGcc                                                                                                                                                    <  2:1339386‑M1/4‑1 (MQ=255)      ctcaagggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCctct                                                                                                                                                 <  1:304159‑M1/7‑1 (MQ=255)        cagcagCGTGGGGAAGTGCAGAGGGCGGTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCTGGGAGTCGTTGTTGTTGCCGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACACGTGAGCCTGTGCCGGGCTCTTc                                                                                                                                               <  2:720264/150‑1 (MQ=255)         aagggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTcg                                                                                                                                              <  2:571776‑M1/10‑1 (MQ=255)          gcagcGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTcgc                                                                                                                                             >  1:1314941/1‑150 (MQ=255)           gggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTcgcg                                                                                                                                            <  1:994464‑M1/12‑1 (MQ=255)           cagcGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCATAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTcgcg                                                                                                                                            >  1:108071/1‑150 (MQ=255)            ggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCgg                                                                                                                                           >  2:1476949‑M1/138‑150 (MQ=255)            ggcgaggcggacagcctgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCgg                                                                                                                                           >  2:467099‑M1/138‑150 (MQ=255)            agcGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCgg                                                                                                                                           <  1:1233783/150‑1 (MQ=255)               gTGGCGACGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACACGTGAGCCTGTGCCGGCCTCTTCGCGGGTa                                                                                                                                        >  2:124158/1‑150 (MQ=255)                       gTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCAGGGAGTAGCTGTTGTTGCAGAAGCCGGCTTCAATCTGGGTGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCt                                                                                                                                >  1:920899/1‑150 (MQ=255)                        tGCAGACTGCTTTGAGCAATTTGCAGCCGTTCCGGCGGCAGAGTCGGTAGTCGTTGTTGTTTCAGAAGCCGGCTTCAATCAAGAAGGCTGTCTTCCTTATTTGGTTACACAAGTGAGCCTGTGCCGGCTTCTTCGCGGGTAAACCCGCTc                                                                                                                               <  2:143187/150‑1 (MQ=255)                            tgccgattccgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTCCTAc                                                                                                                           <  2:1476826‑M1/29‑1 (MQ=255)                                 cGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAagta                                                                                                                      <  1:1313342/150‑1 (MQ=255)                                 cGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAagta                                                                                                                      >  1:488473/1‑150 (MQ=255)                                  gTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAagtag                                                                                                                     <  1:173428/150‑1 (MQ=255)                                  gTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCAGGATTTAATACAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAagtag                                                                                                                     <  2:309270/150‑1 (MQ=39)                                     gAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGc                                                                                                                  <  1:245364/150‑1 (MQ=255)                                     cgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAAc                                                                                                                                     >  2:1032552‑M1/113‑131 (MQ=255)                                     cgttttcgccgatgagcggtgtgagcgcgccttcgctgcggacagcgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAAc                                                                                                                                     <  1:1032552‑M1/19‑1 (MQ=255)                                        cAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTTAACTTGCTCCTACAAGTAGTGCAcc                                                                                                               <  2:250825/150‑1 (MQ=255)                                        cAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCAcc                                                                                                               >  2:1461963/1‑150 (MQ=255)                                              gCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTCGTGCACCGCCTga                                                                                                         <  1:322784/150‑1 (MQ=255)                                               cAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTgag                                                                                                        >  2:566447/1‑150 (MQ=255)                                                aGCGGTTCCGGCGGCAGAGCGGGGAGTCGTGGTTGTTGCAGAAGCCGGCGTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGTCGGCCGCTTCGCGGGTAAACCGGCTCCTACAAGTAGTGCACCGCCTgaga                                                                                                       <  2:635633/150‑1 (MQ=255)                                                       ccGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCtgt                                                                                                >  2:699419/1‑150 (MQ=255)                                                          gcggcAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTgtggt                                                                                             <  2:1235448/150‑1 (MQ=255)                                                                 ccctcctctgcggacagcgttgtatgagtccggtttttcgctgtaccccgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTg                                                                                      >  2:129106‑M1/85‑150 (MQ=255)                                                                   ccGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCgg                                                                                                                                           <  1:382606/95‑1 (MQ=255)                                                                   ccGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCgg                                                                                                                                           >  2:382606/1‑95 (MQ=255)                                                                   ccGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTa                                                                                    >  2:1385292/1‑150 (MQ=255)                                                                          tCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg                                                                             >  1:590494/1‑150 (MQ=255)                                                                          tCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg                                                                             <  1:868935/150‑1 (MQ=255)                                                                          tCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg                                                                             >  2:1631066/1‑150 (MQ=255)                                                                            gttgttgttGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTcgc                                                                                                                                             >  2:3346/1‑84 (MQ=255)                                                                            gttgttgttGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTcgc                                                                                                                                             <  1:3346/84‑1 (MQ=255)                                                                                  cgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAAccc                                                                                                                                   >  2:1369570‑M1/68‑88 (MQ=255)                                                                                  cgttctatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAAccc                                                                                                                                   <  1:1369570‑M1/21‑1 (MQ=255)                                                                                       tatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTc                                                                                                                               >  2:118792‑M1/63‑87 (MQ=255)                                                                                       tatgagtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTc                                                                                                                               <  1:118792‑M1/25‑1 (MQ=255)                                                                                        gAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAag                                                               >  1:239595/1‑150 (MQ=255)                                                                                        gAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCCCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAag                                                               >  1:1476826/1‑150 (MQ=255)                                                                                          aGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAagag                                                             <  1:1631066/150‑1 (MQ=255)                                                                                           gCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTAAACCcgctcctaca                                                            <  1:124158/150‑8 (MQ=255)                                                                                           agtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCgg                                                                                                                                           <  2:1017493‑M1/13‑1 (MQ=255)                                                                                           agtccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCgg                                                                                                                                           >  1:1017493‑M1/59‑71 (MQ=255)                                                                                            ccGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACa                                                                                                                          >  2:316824/1‑87 (MQ=255)                                                                                            ccGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACa                                                                                                                          <  1:316824/87‑1 (MQ=255)                                                                                             tccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCg                                                                              <  2:1131186‑M1/74‑1 (MQ=255)                                                                                             tccggtttttcgctgtaccacgcggggcagtgcctgagggttgtgttgtaagtactGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCg                                                                              >  1:1131186‑M1/57‑130 (MQ=255)                                                                                              ggCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                         <  1:24355/150‑1 (MQ=255)                                                                                               gCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGACCCTGTAGGAGCGGGTTTACCCTCGAAGAGGCCAg                                                        <  1:699419/150‑1 (MQ=255)                                                                                                 ttCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTa                                                      <  2:108071/150‑1 (MQ=255)                                                                                                 ttCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTa                                                      >  1:1505678/1‑150 (MQ=255)                                                                                                      tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTTTGCCGGCCTCTTCGCGGGGAAACCCGCTACTAGAAGTAGTGCACCTCGTTAGAGGGCTGTGGCGAACGTGCACGAGTGGTTTTACCCGCTCAGAGGCGAGTACTTac                                                 >  1:571776/1‑150 (MQ=255)                                                                                                      tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCtgtg                                                                                               <  2:941002/104‑1 (MQ=255)                                                                                                      tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCtgtg                                                                                               >  1:941002/1‑104 (MQ=255)                                                                                                      tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTac                                                 >  2:316919/1‑150 (MQ=255)                                                                                                        aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAAccc                                                                                                                                   <  1:920409/66‑1 (MQ=255)                                                                                                        aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAAccc                                                                                                                                   >  2:920409/1‑66 (MQ=255)                                                                                                        aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGagag                                                                                                      >  2:738858/1‑95 (MQ=255)                                                                                                        aagaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGagag                                                                                                      <  1:738858/95‑1 (MQ=255)                                                                                                                tGGGTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAAccc                                       <  2:239595/150‑1 (MQ=255)                                                                                                                tGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTg                                                                                                          <  1:1170440/83‑1 (MQ=255)                                                                                                                tGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTg                                                                                                          >  2:1170440/1‑83 (MQ=255)                                                                                                                tGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg                                                                             <  1:1545057/112‑1 (MQ=255)                                                                                                                tGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCgg                                                                             >  2:1545057/1‑112 (MQ=255)                                                                                                                  gCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                           >  2:829801/1‑128 (MQ=255)                                                                                                                  gCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                           <  1:829801/128‑1 (MQ=255)                                                                                                                  gCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTc                                     >  1:385948/1‑150 (MQ=255)                                                                                                                         gAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACt                              >  1:1502344/1‑150 (MQ=255)                                                                                                                                  gCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                     <  2:1314941/150‑1 (MQ=255)                                                                                                                                   cacaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                    <  1:316919/150‑1 (MQ=255)                                                                                                                                    acaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTgg                   >  2:374152/1‑150 (MQ=255)                                                                                                                                    acaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGCTCGACCGCTTTAATCGGGTTTACCCGCGCAGCGAGAAGCAGTGACAACGTAAGGCTCAGACACCGCCCCGCGTgg                   >  1:1104075/1‑150 (MQ=16)                                                                                                                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGagag                                                                                                      >  2:1561228/1‑65 (MQ=255)                                                                                                                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGagag                                                                                                      <  1:1561228/65‑1 (MQ=255)                                                                                                                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAAcc                                        >  2:904900/1‑127 (MQ=255)                                                                                                                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                 >  2:994464/1‑150 (MQ=255)                                                                                                                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAATACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTa                 >  2:815117/1‑150 (MQ=255)                                                                                                                                      aaGTGAGCCTGTGCATCCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAAcc                                        <  1:904900/127‑1 (MQ=255)                                                                                                                                                  gCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAAcc     <  1:1385292/150‑1 (MQ=255)                                                                                                                                                   ccGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCg    >  1:1339386/1‑150 (MQ=255)                                                                                                                                                   ccGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCg    <  2:1505678/150‑1 (MQ=255)                                                                                                                                                    tGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCcgc                                                                   <  2:909114‑M1/85‑1 (MQ=255)                                                                                                                                                    tGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCcgc                                                                   >  1:909114‑M1/2‑86 (MQ=255)                                                                                                                                                     GGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGGGGGCTGTGGTGAACCTGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAACACcggc  <  2:138586‑M1/150‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CTGTTTGCAGCAGCGTGGCGAAGTGCAGACGGCGTTGAGCAAATTGCAGCGGTTCCGGCGGCAGAGCCGGGAGTCGTTGTTGTTGCAGAAGCCGGCTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGA  >  NC_002947/6000811‑6001108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.