New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6173359 =92 (1.540)4 (0.070) 3/228 NT 4.5% coding (1336/1368 nt) glmU bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase
?NC_002947 6173391 = 81 (1.420)coding (1304/1368 nt) glmU bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGAACACGT  >  NC_002947/6173216‑6173505
                                                                                                                                               |                                                                                                                                                  
cTGTGGATTGTTTGCTTCTACGTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGa                                                                                                                                              >  2:887360/1‑150 (MQ=255)
   tgGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAAt                                                                                                                                           >  2:1523731/1‑150 (MQ=255)
      aTTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGtt                                                                                                                                        <  2:169958/150‑1 (MQ=255)
       ttGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCCCCGGGCGCTTCCAGCCCGAAATGTTg                                                                                                                                       <  1:873700/150‑1 (MQ=255)
              cTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgc                                                                                                                                <  1:144097/150‑1 (MQ=255)
               ttCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcg                                                                                                                               >  2:73769/1‑150 (MQ=255)
               ttCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgcg                                                                                                                               >  1:1619559/1‑150 (MQ=255)
                     tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg                                                                                                                         >  2:398239/1‑150 (MQ=255)
                     tttGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGACGGCTTTCGATGGCAAGGGCTGGTAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACg                                                                                                                         >  1:609462/1‑150 (MQ=255)
                            cGGTCCGATAGGCGCAGCCGCGCCAATAAAAAAGCGGGCTTATTAACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTATTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACa                                                                                                                  <  2:711478/150‑1 (MQ=255)
                                 ttattggCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg                                                                                                             >  1:1387418/6‑150 (MQ=255)
                                 cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgc                                                                                                                                <  2:231930/131‑1 (MQ=255)
                                 cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgc                                                                                                                                >  1:231930/1‑131 (MQ=255)
                                 cTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAg                                                                                                             >  1:1557239/1‑150 (MQ=255)
                                    ttggCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcg                                                                                                                                     <  2:741480/121‑1 (MQ=255)
                                    ttggCGCGGCTGCGCCTATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcg                                                                                                                                     >  1:741480/3‑123 (MQ=255)
                                       gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc                                                                                                       <  1:1523731/150‑1 (MQ=255)
                                       gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc                                                                                                       <  2:1619559/150‑1 (MQ=255)
                                       gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc                                                                                                       >  2:1117301/1‑150 (MQ=255)
                                       gcgcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAACAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCAcc                                                                                                       >  2:1190376/1‑150 (MQ=255)
                                         gcAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCg                                                                                                     >  2:1451936/1‑150 (MQ=255)
                                              cgcgCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcgc                                                                                                                                    <  1:802907/114‑1 (MQ=255)
                                              cgcgCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTgcgc                                                                                                                                    >  2:802907/1‑114 (MQ=255)
                                               gcgcCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCCGCAGGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTa                                                                                               >  1:513534/1‑150 (MQ=255)
                                                  ccAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACac                                                                                            <  2:1511251/150‑2 (MQ=255)
                                                  ccAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAg                                                                                            >  2:664050/1‑150 (MQ=255)
                                                      tAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTg                                                                                        >  2:603441/1‑150 (MQ=255)
                                                       aaaaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg                                                                                       <  1:73769/150‑1 (MQ=255)
                                                         aaaaGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGt                                                                                     >  2:48605/1‑150 (MQ=255)
                                                             gCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATg                                                                                 <  2:609462/150‑1 (MQ=255)
                                                             gCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAACAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATg                                                                                 <  1:1190376/150‑1 (MQ=255)
                                                               cGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGt                                                                               <  1:1347623/150‑1 (MQ=255)
                                                               cGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGt                                                                               >  1:769351/1‑150 (MQ=255)
                                                                  cTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGAAAGCACTGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGa                                                                            <  1:1117301/150‑1 (MQ=255)
                                                                     aTTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGcc                                                                         >  1:286815/1‑150 (MQ=255)
                                                                       tCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg                                                                                       <  2:299637/134‑1 (MQ=255)
                                                                       tCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTgg                                                                                       >  1:299637/1‑134 (MQ=255)
                                                                         acaTAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCt                                                                     >  1:237523/1‑150 (MQ=255)
                                                                               gTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATgg                                                                                >  2:587213/1‑133 (MQ=255)
                                                                               gTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATgg                                                                                <  1:587213/133‑1 (MQ=255)
                                                                                      ttCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGc                                                                                                                                                  >  2:903810/1‑60 (MQ=255)
                                                                                      ttCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGc                                                                                                                                                  <  1:903810/60‑1 (MQ=255)
                                                                                       tCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGcc                                                       <  2:1557239/150‑1 (MQ=255)
                                                                                          aTGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCgtc                                                    <  2:1594134/150‑3 (MQ=255)
                                                                                           tGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGcc                                                   <  1:887360/150‑1 (MQ=255)
                                                                                             gAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCtt                                                 >  1:1486820/1‑150 (MQ=255)
                                                                                              aaaGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTg                                                >  1:371017/1‑150 (MQ=255)
                                                                                               aaGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGa                                               <  2:1465212/150‑1 (MQ=255)
                                                                                                    cTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTAACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTca                                          >  1:1068815/1‑149 (MQ=255)
                                                                                                     tgtgAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         <  2:729912/150‑1 (MQ=255)
                                                                                                     tgtgAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         >  1:729912/1‑150 (MQ=255)
                                                                                                     tgtgAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         >  1:633571/1‑150 (MQ=255)
                                                                                                     tgtgAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         <  2:237523/150‑1 (MQ=255)
                                                                                                        gAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAg                                      >  2:988234/1‑150 (MQ=255)
                                                                                                          aTAAGTCAGCTCTGCTTGTTCTTCTGCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGGTACATCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGgc                                    <  2:71446/150‑1 (MQ=255)
                                                                                                              cTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGcca                                >  1:1047862/1‑150 (MQ=255)
                                                                                                              cTCAGCTCTTCTTGATCTTCTCCGGGAGCCTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGcca                                >  1:1485863/1‑150 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGc                                                                                                                <  1:260369/69‑1 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGc                                                                                                                >  2:260369/1‑69 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGt                                                                                     >  1:1643076/1‑96 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGt                                                                                     <  2:1643076/96‑1 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         >  2:1115389/1‑140 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCca                                         <  1:1115389/140‑1 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGccac                               <  2:1516068/150‑1 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGccac                               >  1:169792/1‑150 (MQ=255)
                                                                                                               tCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTATCCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGccac                               >  1:522665/1‑150 (MQ=255)
                                                                                                                 aGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGccacca                             <  2:1486820/150‑1 (MQ=255)
                                                                                                                   ctgttcttcATGTTCTCCGGGCGCTTCCAGGCCGAAATGTTCCCCTAGCGCGGGCGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGc                           >  2:484043/4‑150 (MQ=255)
                                                                                                                    tcttctTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCg                          >  1:664026/1‑150 (MQ=255)
                                                                                                                    tcttctTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCAAGGGCCACTGCCAGGTCACCCGCGCTGACAGCCTGGGTGATGGTCGAGCCGGCTGCGGGGGTCGCGCCGGCCTTGATTTGCACAGGCGCCACCAGCg                          >  1:198373/1‑150 (MQ=255)
                                                                                                                     cttcttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGa                         <  1:188399/150‑1 (MQ=255)
                                                                                                                      ttcttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAg                        <  1:664050/150‑1 (MQ=255)
                                                                                                                      ttcttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAg                        >  1:614908/1‑150 (MQ=255)
                                                                                                                      ttcttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAg                        <  1:988234/150‑1 (MQ=255)
                                                                                                                        cttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAgtt                      >  2:822975/1‑150 (MQ=255)
                                                                                                                         ttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgc                                                                                                                                >  1:968620/1‑43 (MQ=255)
                                                                                                                         ttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGgc                                                                                                                                <  2:968620/43‑1 (MQ=255)
                                                                                                                         ttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTg                                                                                        <  1:467457/83‑1 (MQ=255)
                                                                                                                         ttGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTg                                                                                        >  2:467457/1‑83 (MQ=255)
                                                                                                                            aTCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTc                  <  2:769351/150‑1 (MQ=255)
                                                                                                                               ttctCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGACAGGTGACCCGCTTCTACAGCCTGGGTGATGGTCGCGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGaa               >  1:547591/1‑150 (MQ=255)
                                                                                                                                 ctcCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAgttg                     <  2:157210/142‑1 (MQ=255)
                                                                                                                                 ctcCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAgttg                     >  1:157210/1‑142 (MQ=255)
                                                                                                                                   ccGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGa           <  2:1047862/150‑1 (MQ=255)
                                                                                                                                    cGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACgg                                                                                                                        >  1:789265/1‑40 (MQ=255)
                                                                                                                                    cGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACgg                                                                                                                        <  2:789265/40‑1 (MQ=255)
                                                                                                                                    cGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGAt          <  1:48605/150‑1 (MQ=255)
                                                                                                                                    cGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGAt          >  1:990730/1‑150 (MQ=255)
                                                                                                                                       gcgcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGaa       <  2:1387418/150‑1 (MQ=255)
                                                                                                                                        cgcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGAac      <  2:169792/150‑1 (MQ=255)
                                                                                                                                         gcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGc                                                                                           >  2:1205085/1‑64 (MQ=255)
                                                                                                                                         gcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGc                                                                                           <  1:1205085/64‑1 (MQ=255)
                                                                                                                                         gcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTggg                                                                                      >  2:375387/1‑69 (MQ=255)
                                                                                                                                         gcTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTggg                                                                                      <  1:375387/69‑1 (MQ=255)
                                                                                                                                          cTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGAacac    <  2:664026/150‑1 (MQ=255)
                                                                                                                                           ttCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGc                           <  1:1385904/126‑1 (MQ=255)
                                                                                                                                           ttCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGc                           >  2:1385904/1‑126 (MQ=255)
                                                                                                                                            tCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGAACACGt  <  1:1220227/150‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                  
CTGTGGATTGTTTGCTTCTGCTTTGAGGCGGTCCTATAGGCGCAGCCGCGCCAATAAAAAAGCCGACTTATTCACATAAGTCGGCTTTCGATGGAAAGGGCTGTGAATAACTCAGCTCTTCTTGATCTTCTCCGGGCGCTTCCAGCCCGAAATGTTGCGCTGGCGCGCACGGGCTACAGCCAGGTCACCCGCTTCTACAGCCTGGGTGATGGTCGAGCCGGCTGCGGTGGTCGCGCCGGCCTTGATTTCCACAGGCGCCACCAGCGAGTTGTTCGAACCGATGAACACGT  >  NC_002947/6173216‑6173505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.