| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401360 = | 43 (0.720) | 14 (0.260) | 10/214 | NT | 30.0% | coding (943/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3968949 = | 27 (0.510) | coding (1033/1179 nt) | PP_3498 | transposase | |||||
TTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCA > NC_002947/3968832‑3969098 | tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAaggag > 2:308759‑M2/118‑150 (MQ=255) cagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg < 2:585787‑M2/34‑1 (MQ=255) cgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctg < 1:308759‑M2/48‑1 (MQ=255) ctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagatgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCa > 2:1019087‑M2/99‑141 (MQ=255) ctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcacatttcgattagccagatgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCa < 1:1019087‑M2/43‑1 (MQ=255) tttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctccTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATc < 1:1040902‑M2/42‑1 (MQ=255) tttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcagatttcgattagccagcctgatcgccgcctccTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATc > 2:1040902‑M2/95‑136 (MQ=255) gCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTatat < 1:550361/150‑1 (MQ=31) ttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcggc > 2:666878‑M2/76‑113 (MQ=255) ttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcggc < 1:666878‑M2/38‑1 (MQ=255) gtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctccTTGCGCTGGCTATccc < 2:554668‑M2/16‑1 (MQ=255) gtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcctgatcgccgcctccTTGCGCTGGCTATccc > 1:554668‑M2/74‑89 (MQ=255) gatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCt < 1:874123/150‑1 (MQ=32) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTAc < 2:846655/150‑1 (MQ=32) aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTAc < 2:847828/150‑1 (MQ=32) gggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTCTCCCGCCTTGGGCGCCAGGAGGCGGTTATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACa < 1:1435793/150‑1 (MQ=255) gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCTATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCTTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACaga < 2:675602/150‑1 (MQ=17) gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGa > 1:1300170/1‑150 (MQ=32) ccGTCTTGAGCCAGCTAAGGCTTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg < 1:1060372/150‑1 (MQ=17) ccGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg < 1:473468/150‑1 (MQ=32) cagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATc < 1:473431‑M2/55‑1 (MQ=255) cagggcccatataatccgcagatttcgattagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATc > 2:473431‑M2/52‑106 (MQ=255) tCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCCgg < 1:1646905/147‑1 (MQ=17) tCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg > 2:1646905/1‑147 (MQ=32) gCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCTAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAAc < 1:1415406/150‑1 (MQ=17) cTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCaaa < 2:1367127/150‑1 (MQ=32) tAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAc < 1:265048/150‑1 (MQ=32) tAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAc < 2:1300170/150‑1 (MQ=32) ggCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg < 1:1547214/132‑1 (MQ=32) ggCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAgg > 2:1547214/1‑132 (MQ=33) ggCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcga > 1:1539912/1‑150 (MQ=32) gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa < 1:1059580/150‑1 (MQ=32) gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa < 1:177178/150‑1 (MQ=32) gATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGCTCAGGCTGGCTAATCGAAATCTGCGGATTATATAAGCTCTGTTACATAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAAcag > 2:1577130/1‑148 (MQ=11) gATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATggg > 1:884248/1‑100 (MQ=33) gATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATggg < 2:884248/100‑1 (MQ=33) gATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg > 1:1473206/1‑150 (MQ=32) attagccagcctgatcgccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg > 2:1609774‑M2/25‑150 (MQ=255) ccgatctaGATGATCGCCGCCTCTTGCGCTGGGTGCCTGGCCGTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCgg < 2:386925/143‑1 (MQ=11) ccAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTAGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGAGGATTATATGGGCCATGTTACAGAGCTATCAGGTTTACCAACGAAAAAAAAAAAAAAAACCGGa < 2:1156191/149‑1 (MQ=11) aGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAgg > 1:620590/1‑150 (MQ=32) gCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggc > 2:941219/1‑150 (MQ=32) cAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcgg < 1:941219/150‑1 (MQ=32) cAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcgg < 1:1056844/150‑1 (MQ=32) aGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcggc < 2:1539912/150‑1 (MQ=32) gatgatCGCCGCCTCTTGCGCTGGCTATCCCGAGAAAGTCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGaagatcgg > 1:386925/1‑143 (MQ=11) atgatCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTa < 2:620590/150‑1 (MQ=32) gccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATc < 1:947465‑M2/94‑1 (MQ=255) gccgcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATc > 2:947465‑M2/9‑102 (MQ=255) ccgacTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCAGATTATATGGGCCATGTTACAAAGACAACAAAATTAAAAAAAAAAAAAAAAAAAAAAACCGGAGGCGGCTATGAGCct < 2:1294930/150‑1 (MQ=2) gcctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctct > 2:214428‑M2/6‑150 (MQ=255) cctcTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTg < 1:1609774‑M2/146‑1 (MQ=255) cTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGaaaaa > 2:851401‑M2/2‑124 (MQ=255) cTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGaaaaa < 1:851401‑M2/123‑1 (MQ=255) ttGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGTAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCa > 2:819048/1‑150 (MQ=17) ttGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCa > 2:970143/1‑150 (MQ=32) | TTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCA > NC_002947/3968832‑3969098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |