| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2119838 = | 54 (0.900) | 6 (0.100) | 5/232 | NT | 10.6% | coding (946/2355 nt) | PP_1885 | hypothetical protein |
| ? | NC_002947 | 2119861 = | 49 (0.850) | coding (969/2355 nt) | PP_1885 | hypothetical protein | |||||
AGGCTCAGTTCGATGAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGAA > NC_002947/2119716‑2120009 | aGGCTCAGTTCGATGAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCg < 1:1199521/150‑1 (MQ=255) gCTCAGTTCGATGAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGAt > 2:749765/1‑150 (MQ=255) gAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCt > 1:1212015/1‑150 (MQ=255) gAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCt > 2:604499/1‑150 (MQ=255) cAATAACCTGCAGCGGCACTAGGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCt < 1:83737/150‑1 (MQ=255) tAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGc > 2:1331581/1‑150 (MQ=255) tgcaatgggacttccagtgctggcggacctcatcgtgttcaaaggtgacactcagaaggggctgaaaatccgccagggcagcccgcgcctgatcgctgGCCGTGGACGCAGGGGCCCCGGCCAGc > 2:971604‑M1/99‑125 (MQ=255) tgcaatgggacttccagtgctggcggacctcatcgtgttcaaaggtgacactcagaaggggctgaaaatccgccagggcagcccgcgcctgatcgctgGCCGTGGACGCAGGGGCCCCGGCCAGc < 1:971604‑M1/27‑1 (MQ=255) ggCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGc < 2:1380971/150‑1 (MQ=255) ccACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGa < 1:1446826/150‑1 (MQ=255) cTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCa > 2:1378322/1‑128 (MQ=255) cTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCa < 1:1378322/128‑1 (MQ=255) cTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCttt < 2:574427/150‑1 (MQ=255) tGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTg < 1:742789/150‑1 (MQ=255) ttGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGc < 1:477550/116‑1 (MQ=255) ttGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGc > 2:477550/1‑116 (MQ=255) ttGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa > 1:1061621/1‑150 (MQ=255) ttGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa < 2:1648202/150‑1 (MQ=255) ggAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAaca > 1:210343/1‑150 (MQ=255) ggAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAaca < 1:749765/150‑1 (MQ=255) ttcaaaggtgacactcagaaggggctgaaaatccgccagggcagcccgcgcctgatcgctgGCCGTGGACGCAGGGGCCCCGGCCa > 2:1426703‑M1/62‑86 (MQ=255) ttcaaaggtgacactcagaaggggctgaaaatccgccagggcagcccgcgcctgatcgctgGCCGTGGACGCAGGGGCCCCGGCCa < 1:1426703‑M1/25‑1 (MQ=255) ggTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGa < 2:1274436/150‑1 (MQ=255) gtgtACCACAGCACTTATGAGAGCGACCAGTATCCCTTTGCCTGCGAGGGTTTCTGTCTTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGAt < 1:677242/150‑1 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGc > 1:290214/1‑115 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGc < 2:290214/115‑1 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCAc > 2:790383/1‑131 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCAc < 1:790383/131‑1 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTc > 2:1256172/1‑150 (MQ=255) cccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTc < 2:1061621/150‑1 (MQ=255) ccAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGTTTCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTcc > 1:529311/1‑150 (MQ=255) cACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCa < 1:414916/150‑1 (MQ=255) ttATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCa > 2:930069/1‑150 (MQ=255) aTGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGAACGCAGGGGCCCCGGCCAGCGATAAGGCGCGGGCTGCCCTGGAGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACt < 1:1446075/150‑1 (MQ=255) tGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGACCAGCGATCAGGCGCGGGCTGCCCTGGCGGAt < 2:9765/97‑1 (MQ=255) tGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGACCAGCGATCAGGCGCGGGCTGCCCTGGCGGAt > 1:9765/1‑97 (MQ=255) cGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTc < 2:1212015/150‑1 (MQ=255) taCAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTcc < 1:819305/149‑1 (MQ=255) aCAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTccc > 2:571336/1‑150 (MQ=255) cAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCa < 1:895061/135‑1 (MQ=255) cAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCa > 2:895061/1‑135 (MQ=255) aGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCAtt < 1:571336/150‑1 (MQ=255) gTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTg > 1:1161950/1‑150 (MQ=255) aGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGc < 1:604499/150‑1 (MQ=255) tttGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTCTCAGACCTTTCACCATGGCACCGTGGATCACGACGAGGTCCGCCAGCACTGGACGTCCCATTGCACGCTg > 1:603394/1‑150 (MQ=255) cTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGc > 2:718674/1‑80 (MQ=255) cTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGc < 1:718674/80‑1 (MQ=255) gCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCa < 1:930069/150‑1 (MQ=255) tCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTAcaagc < 1:1256172/150‑1 (MQ=255) tgaaccgccgcggccgcgGGCTCCTCGGCCACCGCGCACCCGCGGGCTTCCCTGGCGGGAAGTCAGCCCCGTCGGGGTGTCACGTTTGAACACGATGAGATCCGCCAGCACGGGAAATCCCATAACAAGCTAACCTTCACCTAcaagccc > 2:422961/7‑150 (MQ=255) aaaaTTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGa > 2:1448561/1‑76 (MQ=255) aaaaTTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGa < 1:1448561/76‑1 (MQ=255) gctggccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCa > 2:971604‑M2/28‑125 (MQ=255) gctggccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCa < 1:971604‑M2/98‑1 (MQ=255) tggccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa > 2:1426703‑M2/26‑86 (MQ=255) tggccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa < 1:1426703‑M2/61‑1 (MQ=255) gccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa < 1:781276‑M2/61‑1 (MQ=255) gccggggcccctgcgtccacggcCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGaa > 2:781276‑M2/24‑84 (MQ=255) GTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACa > 2:1161950‑M1/1‑150 (MQ=255) GTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACa < 1:1201831‑M1/150‑1 (MQ=255) tGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAg > 1:1406963/1‑150 (MQ=255) aCGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTc < 2:881872/150‑1 (MQ=255) ggCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGCCCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTa < 1:1331581/150‑1 (MQ=255) ccccGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACa > 2:296019/1‑150 (MQ=255) cCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGaa < 1:296019‑M2/149‑1 (MQ=255) | AGGCTCAGTTCGATGAAGACAATAACCTGCAGCGGCTGAATGCCACGGCCGGCCTGTTGGAGGTGTACCCCAGCACTTATGAGAGCGACAAGTATCAGTTTGCCTGCGAGGGTTTCAAAATTGCCGTGGACGCAGGGGCCCCGGCCAGCGATCAGGCGCGGGCTGCCCTGGCGGATTTTCAGCCCCTTCTGAGTGTCACCTTTGAACACGATGAGGTCCGCCAGCACTGGAAGTCCCATTGCACGCTGACCTTCACCTACAAGCCCAAGCCAACAGGTCCCCTGTACAGCCGAA > NC_002947/2119716‑2120009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |