New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4442600 =	49 (0.820)	5 (0.080)	5/238	NT	9.4%	intergenic (‑26/+112)	nicP‑II/nicT	porin‑like protein/metabolite transport protein NicT
	?	NC_002947	4442649 =	48 (0.810)					intergenic (‑75/+63)	nicP‑II/nicT	porin‑like protein/metabolite transport protein NicT

ACACAAAGCGGCGGCAATACAACCGCCGGCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCACAGCGCAGC  >  NC_002947/4442500‑4442795                                                                                                                                                       |                                                                                                                                                   acacaAAGCGGCGGCAATACAACCGCCGGCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATc                                                                                                                                                    >  2:1645799/1‑150 (MQ=255)    catcgccttgccggccaagctggtcaaccgctagcggcccagcgcttcacgcaacggcagggcaggcgggccggggcccgcctgccgacctctctcgATGCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCga                                                                                                                                                  >  1:1163117‑M1/98‑150 (MQ=255)                   acaacaGCCGGCCAGGCGTGCAGACGAAGAAGAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCg                                                                                                                                  >  2:1011871/1‑150 (MQ=255)                   aCAACCGCCGGCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCg                                                                                                                                  >  1:907924/1‑150 (MQ=255)                      aCCGCCGGCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGc                                                                                                                               <  2:565720/150‑1 (MQ=255)                            ggCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGc                                                                                                                         >  2:681045/1‑150 (MQ=255)                            ggCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGc                                                                                                                         <  2:789656/150‑1 (MQ=255)                              accgctagcggcccagcgcttcacgcaacggcagggcaggcgggccggggcccgcctgccgacctctctcgA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCgaga                                                                                                                                                <  1:1211593‑M1/54‑1 (MQ=255)                              accgctagcggcccagcgcttcacgcaacggcagggcaggcgggccggggcccgcctgccgacctctctcgA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCgaga                                                                                                                                                >  2:1211593‑M1/72‑125 (MQ=255)                                  gCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGcct                                                                                                                   <  1:681045/150‑1 (MQ=255)                                    gTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGcctgc                                                                                                                 <  2:824115/150‑1 (MQ=255)                                        aGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGcctgccctg                                                                                                             >  2:240354/1‑150 (MQ=255)                                          aCGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCctgccctgcc                                                                                                           >  2:152978/1‑150 (MQ=255)                                             aagaaAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGtt                                                                                                        >  2:1638486/1‑150 (MQ=255)                                                  aaaCGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTg                                                                                                   >  1:656171/1‑150 (MQ=255)                                                    aCGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGaa                                                                                                 <  2:1481431/150‑1 (MQ=255)                                                        ggcgCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAgcgc                                                                                             <  2:321568/150‑1 (MQ=255)                                                                     cTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTAAAGCGCTGGGCCGCTAGCg                                                                                >  2:1080414/1‑150 (MQ=255)                                                                      ttGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCgg                                                                               <  1:240354/150‑1 (MQ=255)                                                                         cATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTg                                                                            <  2:891828/150‑1 (MQ=255)                                                                           tAGGGCTACTCCTGGATTTGGGCAACA‑GCACCCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGAc                                                                          <  2:331263/150‑1 (MQ=255)                                                                            aGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGAcc                                                                         >  2:198328/1‑150 (MQ=255)                                                                            aGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGAcc                                                                         <  2:463206/150‑1 (MQ=255)                                                                                cTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCt                                                                     <  1:985064/150‑1 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGGCGTTGCGTGAAGCGCTGGGCCGATAGCGGTTGACCAGCTTGGCCg                                                               >  2:658597/1‑150 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGaa                                                                                                 >  1:328778/1‑116 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGaa                                                                                                 <  2:328778/116‑1 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCgg                                                                               <  2:729100/134‑1 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCgg                                                                               >  1:729100/1‑134 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCg                                                               >  2:658586/1‑150 (MQ=255)                                                                                      cTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCg                                                               >  1:486856/1‑150 (MQ=255)                                                                                                gCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGTCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGAt                                                     <  2:907924/150‑1 (MQ=255)                                                                                                 tctcgatgcaacccgcacgccggtggccatgcagtgccgccgcgccgggttgctCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGt                                                                              >  2:1211593‑M2/55‑125 (MQ=255)                                                                                                 tctcgatgcaacccgcacgccggtggccatgcagtgccgccgcgccgggttgctCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGt                                                                              <  1:1211593‑M2/71‑1 (MQ=255)                                                                                                  tcgatgcaacccgcacgccggtggccatgcagtgccgccgcgccgggttgcatCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATg                                                    >  1:1163117‑M2/54‑150 (MQ=255)                                                                                                  aaCA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGa                                                   >  1:146311/1‑150 (MQ=255)                                                                                                      atgcaacccgcacgccggtggccatgcagtgccgccgcgccgggttgctCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCgg                                                                               <  2:452394‑M2/70‑1 (MQ=255)                                                                                                      atgcaacccgcacgccggtggccatgcagtgccgccgcgccgggttgctCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCgg                                                                               >  1:452394‑M2/50‑119 (MQ=255)                                                                                                       gCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAg                                               <  1:1638486/150‑1 (MQ=255)                                                                                                        cAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGa                                                   >  1:755441/1‑145 (MQ=255)                                                                                                        cAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGa                                                   <  2:755441/145‑1 (MQ=255)                                                                                                           cccGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTg                                                                                           <  1:736706/102‑1 (MQ=255)                                                                                                           cccGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTg                                                                                           >  2:736706/1‑102 (MQ=255)                                                                                                                         aCTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAg                             >  2:916734/1‑150 (MQ=255)                                                                                                                         aCTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAg                             >  2:1299530/1‑150 (MQ=255)                                                                                                                         aCTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAg                             >  1:1407758/1‑150 (MQ=255)                                                                                                                           tGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCTGGCCCCGGCCCGCGTGCCCTGCCGTTGCGTGAATCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGGAGCTGAGGATCAGGc                           >  2:783214/1‑150 (MQ=255)                                                                                                                                  ccACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGc                    >  2:600261/1‑150 (MQ=255)                                                                                                                                      cGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAac                <  1:1011871/150‑1 (MQ=255)                                                                                                                                       ggCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGCGGATCAGGCAGCCGGCAAaca               <  2:146311/150‑1 (MQ=255)                                                                                                                                        gCGTGCGGGTTGCATCGAGAGAGGTAGGCAGGCGGGCCCCGGCGCGCCTGCCCTGCCGTTGCGTGAGGCGCTGTGCCGCGAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAacac              >  2:1422684/1‑150 (MQ=255)                                                                                                                                          gTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCaaa                 <  2:1490792/145‑1 (MQ=255)                                                                                                                                          gTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCaaa                 >  1:1490792/1‑145 (MQ=255)                                                                                                                                             cGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCcaca         <  2:1163117/150‑1 (MQ=255)                                                                                                                                              gggTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGGCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCAcag        >  1:1569950/1‑150 (MQ=255)                                                                                                                                              gggTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCAcag        >  1:1581831/1‑150 (MQ=255)                                                                                                                                               ggTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCAcagc       <  1:1299530/150‑1 (MQ=255)                                                                                                                                                    cATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCAcagcgcagc  >  2:1639887/1‑150 (MQ=255)                                                                                                                                                    cATCGAGAGAGGCCGGCAGGCTGGCCCCGGCCCGCCTGCCCTGCCGTTTCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAATGCGATTACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCAcagcgcagc  <  1:783214/150‑1 (MQ=255)                                                                                                                                                     aTCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTg                                                                   <  2:1096789/84‑1 (MQ=255)                                                                                                                                                     aTCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTg                                                                   >  1:1096789/1‑84 (MQ=255)                                                                                                                                                       |                                                                                                                                                   ACACAAAGCGGCGGCAATACAACCGCCGGCCAGGCGTGCAGACGAAGAAAAACGCGGCGCAGTGAAACCTTGCATAGGGCTACTCCTGGATTTGGGCAACA‑GCAACCCGGCGCGGCGGCACTGCATGGCCACCGGCGTGCGGGTTGCATCGAGAGAGGTCGGCAGGCGGGCCCCGGCCCGCCTGCCCTGCCGTTGCGTGAAGCGCTGGGCCGCTAGCGGTTGACCAGCTTGGCCGGCAAGGCGATGACCAGGAAGCAGCTGAGGATCAGGCAGCCGGCAAACACCCACAGCGCAGC  >  NC_002947/4442500‑4442795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.