New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5100019	57 (0.950)	7 (0.150)	6/190	NT	13.2%	intergenic (+57/+96)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 5100051	47 (0.990)					intergenic (+89/+64)	PP_4488/phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator

GGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAA  >  NC_002947/5099906‑5100195                                                                                                                                                  |                                                                                                                                                 ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgt                                                                                                                                              <  1:323579‑M2/150‑5 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgt                                                                                                                                              >  1:1618982‑M2/1‑146 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgt                                                                                                                                              >  1:152947‑M2/1‑146 (MQ=255)     aGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtggga                                                                                                                                          <  1:137398‑M2/150‑9 (MQ=255)       aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagc                                                                                                                                        <  1:1608430‑M2/150‑11 (MQ=255)             aTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggcctt                                                                                                                                  >  2:754812‑M2/1‑134 (MQ=255)                 tctaaTACCGCCTGATGGGGAACGGCTGCTCCAACGGCTAATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAACGCCGCTCACACATATAATGCGCTCATCCAAATCACAGCGTATTACCTGTGGGAGCGGCCTTgtgt                                                                                                                              <  1:251368/147‑1 (MQ=255)                   gAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcg                                                                                                                            <  1:1524318‑M2/150‑23 (MQ=255)                    aaTACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgc                                                                                                                           <  2:1308790‑M2/150‑24 (MQ=255)                                       cGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGt                                                                                                        <  2:323579/150‑1 (MQ=255)                                            gctCCAACGGCTGATACCTTGGAATCAGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAg                                                                                                   <  1:256142/150‑1 (MQ=255)                                             ctCCAATGGCTGATACCTTGGAATCGGGGGACCTGCGGGCCCCAATGGCGCCACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACATGTGGGAGCGGCCTAGTGTCGCGAAAGGACTGCAACGCAGCCCCAgg                                                                                                  >  2:134784/1‑150 (MQ=255)                                              tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc                                                                                                                   >  1:278815/1‑132 (MQ=255)                                              tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGAc                                                                                                                   <  2:278815/132‑1 (MQ=255)                                                 aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACt                                                                                                                  <  1:1402609/130‑1 (MQ=255)                                                 aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACt                                                                                                                  >  2:1402609/1‑130 (MQ=255)                                                  ccgacTGATACCTTGCAATCGGGGGACCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCtt                                                                                             <  1:134784/146‑1 (MQ=255)                                                           aCCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAAc                                                                                                             <  2:383406/125‑1 (MQ=255)                                                           aCCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAAc                                                                                                             >  1:383406/1‑125 (MQ=255)                                                            ccTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACcaacaa                                                                                   <  1:1158727/150‑1 (MQ=255)                                                             cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtg                                                                                                                                             >  1:1374172‑M2/1‑86 (MQ=255)                                                             cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtg                                                                                                                                             <  2:1374172‑M2/91‑6 (MQ=255)                                                             cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCaacaac                                                                                  >  1:1589342/1‑150 (MQ=255)                                                             cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCaacaac                                                                                  >  2:1272419/1‑150 (MQ=255)                                                                    tCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATccg                                                                           >  2:1499635/1‑150 (MQ=255)                                                                            ccTGCGGGTCTCTATCGCGAAACAAGGCCGCTCTCACAGATAATGCGCTCAGTCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTg                                                                   <  2:933485/150‑1 (MQ=255)                                                                            ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCtt                                                                                             <  2:1619659/124‑1 (MQ=255)                                                                            ccTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCtt                                                                                             >  1:1619659/1‑124 (MQ=255)                                                                                cGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTaa                                                               <  1:988744/150‑1 (MQ=255)                                                                                  ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAAc                                                                                                             >  2:1472271/1‑102 (MQ=255)                                                                                  ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAAc                                                                                                             <  1:1472271/102‑1 (MQ=255)                                                                                  ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGc                                                             <  2:137398/150‑1 (MQ=255)                                                                                     cccTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAg                                                          >  1:269241/1‑150 (MQ=255)                                                                                        tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACt                                                                                                                  <  2:1385764/91‑1 (MQ=255)                                                                                        tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACt                                                                                                                  >  1:1385764/1‑91 (MQ=255)                                                                                        tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTaa                                                       >  1:331143/1‑150 (MQ=255)                                                                                        tATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTaa                                                       >  1:493709/1‑150 (MQ=255)                                                                                          tCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATc                                                     <  1:1308790/150‑1 (MQ=255)                                                                                              gACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCa                                                                                                          <  1:879097/93‑1 (MQ=255)                                                                                              gACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCa                                                                                                          >  2:879097/1‑93 (MQ=255)                                                                                              gACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTc                                                 <  2:493709/150‑1 (MQ=255)                                                                                                 acaAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAAc                                              >  1:1507102/1‑150 (MQ=255)                                                                                                    aGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttg                                           >  1:1116134/1‑150 (MQ=255)                                                                                                      gCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTaa                                                                               >  2:1080480/1‑112 (MQ=255)                                                                                                      gCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTaa                                                                               <  1:1080480/112‑1 (MQ=255)                                                                                                      gCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt                                         >  1:1147918/1‑150 (MQ=255)                                                                                                      gCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgtt                                         <  2:269241/150‑1 (MQ=255)                                                                                                       ccGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACttgttg                                        >  1:1128726/1‑150 (MQ=255)                                                                                                           tCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaatgtgcttct                                    <  2:1300180‑M2/150‑111 (MQ=255)                                                                                                           tCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaat                                            >  2:781107‑M2/1‑40 (MQ=255)                                                                                                           tCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttggagcagccgttccccatcacgcggtattcgagaat                                            <  1:781107‑M2/142‑103 (MQ=255)                                                                                                             ccACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAAtt                                  >  1:1121727/1‑150 (MQ=255)                                                                                                              cacaGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttgga                                                                             >  2:1130751‑M2/1‑37 (MQ=255)                                                                                                              cacaGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaaggtatcagccgttgga                                                                             <  1:1130751‑M2/106‑70 (MQ=255)                                                                                                              cacaGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTg                                 >  1:1081923/1‑150 (MQ=255)                                                                                                                caGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaa                                                                                             <  2:429438‑M2/88‑54 (MQ=255)                                                                                                                caGATAATGCGCTCAGCCAGAGCACAGCGTATTACctgtgggagcggccttgtgtcgcgataggggcccgcagggcccccgattccaa                                                                                             >  1:429438‑M2/1‑35 (MQ=255)                                                                                                                caGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTc                               <  2:1116134/150‑1 (MQ=255)                                                                                                                    tAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCgtgt                           <  2:1121727/150‑1 (MQ=255)                                                                                                                          gcTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                         >  2:1529188/1‑82 (MQ=255)                                                                                                                          gcTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGAc                                                                                         <  1:1529188/82‑1 (MQ=255)                                                                                                                                     gCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCtt          <  2:1608430/150‑1 (MQ=255)                                                                                                                                     gCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCtt          <  2:47353/150‑1 (MQ=255)                                                                                                                                       acaGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCtttt        <  2:1507102/150‑1 (MQ=255)                                                                                                                                             tATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACAAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACTCCTATTCTGTTGCCCaa  <  2:68119/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                 GGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGAGTAATCCCTCAACTTGTTGGCAATTGTCGTGTGCGAAACACCCAGTCTTTTGCCCAA  >  NC_002947/5099906‑5100195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.