Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,049,187 A→T 6.5% L139Q (CTG→CAG)  PP_0907 ← RND transporter membrane fusion protein‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,049,1870AT 6.5% 233.4 / 6.7 78L139Q (CTG→CAG) PP_0907RND transporter membrane fusion protein‑like protein
Reads supporting (aligned to +/- strand):  ref base A (34/38);  new base T (3/2);  total (37/41)
Fisher's exact test for biased strand distribution p-value = 6.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01

CATTGATGCGTTTCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCAGGCTCAGATCCACGC  >  NC_002947/1049038‑1049334
                                                                                                                                                     |                                                                                                                                                   
cATTGATGCGTTTCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCa                                                                                                                                                     <  2:879454/150‑1 (MQ=255)
  ttGATGCGTTTCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAgg                                                                                                                                                   <  1:565321/150‑1 (MQ=255)
      tGCGTTTCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCa                                                                                                                                               >  1:842270/1‑150 (MQ=255)
          tttCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTc                                                                                                                                           >  1:1467020/1‑150 (MQ=255)
                gATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAg                                                                                                                                     >  2:957000/1‑150 (MQ=255)
                       tGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCTAGGCCCAGGTCGGCCAGGGCGGTa                                                                                                                              >  1:1312804/1‑150 (MQ=255)
                       tGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTa                                                                                                                              >  2:1210029/1‑150 (MQ=255)
                           ccTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCAGACTCGCTAACCACCTTTCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGa                                                                                                                          >  1:371732/1‑150 (MQ=255)
                               aaGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGAGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAg                                                                                                                      >  2:978617/1‑150 (MQ=255)
                                   tgctCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCt                                                                                                                  <  1:543179/150‑1 (MQ=255)
                                    gctCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTg                                                                                                                 <  2:842270/150‑1 (MQ=255)
                                      tCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAgg                                                                                                                                                   <  1:1236202/114‑1 (MQ=255)
                                      tCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAgg                                                                                                                                                   >  2:1236202/1‑114 (MQ=255)
                                         accaccGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTcc                                                                                                            >  2:1254202/1‑150 (MQ=255)
                                          ccaccGCCTGGTTGCAGCGGTCCTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCt                                                                                                           <  1:424/150‑1 (MQ=255)
                                           caccGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTg                                                                                                          >  1:167902/1‑150 (MQ=255)
                                             ccGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAt                                                                                                        >  2:310782/1‑150 (MQ=255)
                                                ccTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGCCCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAg                                                                                                                      >  1:1133128/1‑133 (MQ=255)
                                                ccTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAg                                                                                                                      <  2:1133128/133‑1 (MQ=255)
                                                 cTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAtcgtc                                                                                                    <  1:957000/150‑1 (MQ=255)
                                                      tGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGa                                                                                               <  2:712185/150‑1 (MQ=255)
                                                         gcCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCt                                                                                            >  1:92411/1‑150 (MQ=255)
                                                         gcCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGACGTTGAGCt                                                                                            >  1:20258/1‑150 (MQ=255)
                                                             gTACTGGGAGGAAAGGCGGTCGCACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCaa                                                                                        <  2:787280/150‑1 (MQ=255)
                                                               aCTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAaga                                                                                      <  1:1498772/150‑1 (MQ=255)
                                                               aCTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAaga                                                                                      <  1:236754/150‑1 (MQ=255)
                                                               aCTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAaga                                                                                      <  2:371732/150‑1 (MQ=255)
                                                                cTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCg                                                                                                                                 >  1:873997/1‑106 (MQ=255)
                                                                cTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCg                                                                                                                                 <  2:873997/106‑1 (MQ=255)
                                                                 tGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGc                                                                                    >  1:908830/1‑150 (MQ=255)
                                                                  gggAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACAAGATGTGTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCa                                                                                   >  2:964570/1‑150 (MQ=255)
                                                                   ggaggaAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAg                                                                                  >  1:1051740/1‑150 (MQ=255)
                                                                    gaggaAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTACTGATCGTCGTTGAGCTGCAAGAGCAGt                                                                                 >  1:539010/1‑150 (MQ=255)
                                                                     aggaAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGtt                                                                                <  2:92411/150‑1 (MQ=255)
                                                                             cGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGcc                                                                        <  1:88071/150‑1 (MQ=255)
                                                                               gTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCtt                                                                      <  1:1523574/150‑1 (MQ=255)
                                                                                  gAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAt                                                                                                        <  1:1047531/113‑1 (MQ=255)
                                                                                  gAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAt                                                                                                        >  2:1047531/1‑113 (MQ=255)
                                                                                      tCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGc                                                                                                                                        <  2:1122964/77‑1 (MQ=255)
                                                                                      tCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGc                                                                                                                                        >  1:1122964/1‑77 (MQ=255)
                                                                                      tCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGAc                                                                   <  1:876767/146‑1 (MQ=255)
                                                                                      tCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGAc                                                                   >  2:876767/1‑146 (MQ=255)
                                                                                            cgGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCGGGTGCCCGGCCTTGACCTGTTGGCCt                                                         <  1:864092/150‑1 (MQ=255)
                                                                                            cgGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCt                                                         <  1:340891/150‑1 (MQ=255)
                                                                                             gggAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTg                                                        >  1:1314054/1‑150 (MQ=255)
                                                                                              ggAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCCGCCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGa                                                       <  1:216770/150‑1 (MQ=255)
                                                                                               gagaTGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAg                                                      <  1:1210029/150‑1 (MQ=255)
                                                                                                    ggCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGaa                                                 <  2:629811/150‑1 (MQ=255)
                                                                                                     gCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGt                                                                                                                <  1:1376032/86‑1 (MQ=255)
                                                                                                     gCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGt                                                                                                                >  2:1376032/1‑86 (MQ=255)
                                                                                                     gCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAtc                                                                                                       <  2:1470850/95‑1 (MQ=255)
                                                                                                     gCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGAtc                                                                                                       >  1:1470850/1‑95 (MQ=255)
                                                                                                           tCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAggg                                                                                                                                   <  2:631663/61‑1 (MQ=255)
                                                                                                           tCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAggg                                                                                                                                   >  1:631663/1‑61 (MQ=255)
                                                                                                              cccACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAggg                                                                                                                    >  2:181424/1‑73 (MQ=255)
                                                                                                              cccACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAggg                                                                                                                    <  1:181424/73‑1 (MQ=255)
                                                                                                                   caGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAg                                           <  1:1553643/141‑1 (MQ=255)
                                                                                                                   caGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAg                                           >  2:1553643/1‑141 (MQ=255)
                                                                                                                      ctggctgCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGAt                               <  1:310782/150‑1 (MQ=255)
                                                                                                                       tggctgCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAagag                                                                                     >  1:1619441/1‑95 (MQ=255)
                                                                                                                       tggctgCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAagag                                                                                     <  2:1619441/95‑1 (MQ=255)
                                                                                                                            gCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGa                                                       <  1:1090322/120‑1 (MQ=255)
                                                                                                                            gCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGa                                                       >  2:1090322/1‑120 (MQ=255)
                                                                                                                             ccACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTcc                        <  1:964570/150‑1 (MQ=255)
                                                                                                                               aCGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCAc                      <  1:1254202/150‑1 (MQ=255)
                                                                                                                                    cctggccGACCTGGGCCTGGCCAAGGTCGACCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCa                                            <  2:47436/117‑1 (MQ=38)
                                                                                                                                    cctggccGACCTGGGCCTGGCCAAGGTCGACCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCa                                            >  1:47436/7‑123 (MQ=38)
                                                                                                                                    cGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGaa                                                 >  1:93712/1‑118 (MQ=255)
                                                                                                                                    cGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGaa                                                 <  2:93712/118‑1 (MQ=255)
                                                                                                                                    cGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCa                 >  2:196977/1‑150 (MQ=255)
                                                                                                                                        gccGACCTGGGCCTGGCCAAGGTCGACCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCAGGCt             >  1:1059022/3‑150 (MQ=255)
                                                                                                                                              cTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATcgtcgt                                                                                                  <  2:1103709/59‑1 (MQ=255)
                                                                                                                                              cTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATcgtcgt                                                                                                  >  1:1103709/1‑59 (MQ=255)
                                                                                                                                               ttGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCAGGCTCAGATcc      <  2:1051740/150‑1 (MQ=255)
                                                                                                                                                 ggCCTGGCCAAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCATTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCATGAGTCGaa                                                 >  1:1187072/1‑105 (MQ=255)
                                                                                                                                                 ggCCTGGCCAAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCATTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCATGAGTCGaa                                                 <  2:1187072/105‑1 (MQ=255)
                                                                                                                                                   ccAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGAt                               <  1:834085/121‑1 (MQ=255)
                                                                                                                                                   ccAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGAt                               >  2:834085/1‑121 (MQ=255)
                                                                                                                                                   ccAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCAGGCTCAGATCCACGc  <  2:1314054/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CATTGATGCGTTTCTTGATCTTCTGCGCCTTAAGCTGCTCGACCACCGCCTGGTTGCGCCGGTACTGGGAGGAAAGGCGGTCGAACTCGCCGCGGGAGATGGCCGAATCGCCCACCAGCTGGCTGCCACGGCCGAAGTCGACCTTGGCCAGGCCCAGGTCGGCCAGGGCGGTACCGAGCAGGGCTGTTTCCTGATCGTCGTTGAGCTGCAAGAGCAGTTGCCCGGCCTTGACCTGTTGGCCTGAGTCGAAGTGCAGGGATTTGACGATGCCTTCCACCTCCAGGCTCAGATCCACGC  >  NC_002947/1049038‑1049334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑