Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,246,284 | C→T | 7.2% | intergenic (+30/+61) | ibpA → / ← PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,246,284 | 0 | C | T | 7.2% | 199.0 / 5.4 | 69 | intergenic (+30/+61) | ibpA/PP_1983 | small heat shock protein IbpA/PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase |
Reads supporting (aligned to +/- strand): ref base C (27/37); new base T (2/3); total (29/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.01e-01 |
AAGTGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAG > NC_002947/2246136‑2246428 | aaGTGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCa > 2:147142/1‑150 (MQ=255) gTGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCACCGAAAGAAAGGGCGCCTCCagc > 1:230700/1‑149 (MQ=255) gTGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCaga < 1:98918/150‑1 (MQ=255) tggaGGCTGCCGGCCTGGCCACTGGCCTGCTCAGCACCGACCAGCTGCGCATCGTGCCTGAAGAGGCCAAGGCTAAGCGCATTCTGATCAATGGCGAAAAACTCGGGCTCAACTGATCAAACTCCAACGACAAAAAAGGCCCCTCCagag > 2:1559337/4‑150 (MQ=255) tGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCagag > 2:1559336/1‑150 (MQ=255) tGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCagag < 2:1341009/150‑1 (MQ=255) tGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCagag < 1:1523346/150‑1 (MQ=255) tGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCagag < 2:58055/150‑1 (MQ=255) aaGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGt < 2:1461018/150‑1 (MQ=255) ccgccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGccc < 2:1209255/150‑1 (MQ=255) ccgccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCGGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGccc < 1:7533/150‑1 (MQ=255) gccgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCtt > 1:711849/1‑150 (MQ=255) cgGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACAAAAAAAAGGGCACCTCCAGAGGTGCCCtttt < 2:679827/150‑1 (MQ=255) gtccTGTCCAATAGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAATCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTTCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCttttt < 2:711849/148‑1 (MQ=255) gCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTc < 2:279415/150‑1 (MQ=255) cTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTGGAGGTGCCCtttttttc < 2:938864/150‑4 (MQ=255) tGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTg < 2:1059806/150‑1 (MQ=255) ggCCAATGGCCTGCTCAGCATCGACCTGTTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGc < 2:802919/150‑1 (MQ=255) cAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTtc > 1:778009/1‑150 (MQ=255) aTGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTGTCGTGCTtctc < 1:556598/150‑1 (MQ=255) tGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑Ag > 1:829281/1‑150 (MQ=255) cAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTccc > 1:909091/1‑150 (MQ=255) tCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTa < 1:671608/150‑1 (MQ=255) aCCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGt > 2:1434384/1‑150 (MQ=255) ctgctgCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTgc > 1:1307883/1‑150 (MQ=255) gctgcGCATCGGGCCTGAAGAAGCCACGGCCAAGCGCCTTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTgcgc < 2:230700/150‑1 (MQ=255) cgcATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGcc < 2:1307883/150‑1 (MQ=255) gcATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCCAC‑CGTGCTAGTCCCGCGTAGGTGCGCGGCCg > 1:820341/1‑150 (MQ=255) aTCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTc > 1:172711/1‑150 (MQ=255) gTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATg < 2:288358/150‑1 (MQ=255) tGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGACAGAAAGGGCACCGCCGGAGGGGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGc < 1:1434384/150‑1 (MQ=255) ccTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGa > 2:624621/1‑150 (MQ=255) cTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGAt < 2:909091/150‑1 (MQ=255) tGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATc > 1:1447595/1‑150 (MQ=255) agCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt > 1:313239/1‑150 (MQ=255) gccaaggccaagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATc < 2:412514/150‑1 (MQ=255) caagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgcg > 2:1032278/1‑150 (MQ=255) aagCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgcgc < 1:1559336/150‑1 (MQ=255) aagCCCATTCTGCTCAATGACCAAAAGCCGCCGCCAAACTGATCGAGCTGCATGGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTGTCGTGCTTCTCTCGC‑AGCCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGgcgc < 1:1559337/150‑1 (MQ=255) cgcATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTc < 2:172413/150‑1 (MQ=255) cgcATTCCGATCAATGGCGAAAAACCAGCGCTGAAATGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCACGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTc < 2:881211/150‑1 (MQ=255) gcATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGt > 2:488882/1‑111 (MQ=255) gcATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGt < 1:488882/111‑1 (MQ=255) gcATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTcc < 2:1447595/150‑1 (MQ=255) ttCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt > 1:1080839/1‑133 (MQ=255) ttCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAAt < 2:1080839/133‑1 (MQ=255) gATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCt < 2:629180/131‑1 (MQ=255) gATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCt > 1:629180/1‑131 (MQ=255) gAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTGGAGGTGCCCt < 2:1239423/62‑1 (MQ=37) gAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCTGGAGGTGCCCt > 1:1239423/1‑62 (MQ=37) aaaaaCCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAAc < 2:1126091/150‑1 (MQ=255) gcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacg < 2:1513742/150‑1 (MQ=255) gcTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacg < 1:624621/150‑1 (MQ=255) aTCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcgg < 1:687895/136‑1 (MQ=255) aTCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcgg > 2:687895/1‑136 (MQ=255) tGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATg < 2:264534/140‑1 (MQ=255) tGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATg > 1:264534/1‑140 (MQ=255) cAACGAAAAAAAGGGCACCTCCAGAGGTGCGCTTTTTAGTGCTTCTCACGG‑AGTCACGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGACACGCCGGTAACGGGAATGGCCGGGTATGCa > 2:673070/1‑150 (MQ=255) gAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAAt < 1:825831/133‑1 (MQ=255) gAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAAt > 2:825831/1‑133 (MQ=255) gaaaaaGGGCACCTCTGGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGaaa > 2:1017763/2‑115 (MQ=255) gaaaaaGGGCACCTCTGGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGaaa < 1:1017763/114‑1 (MQ=255) aaaaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAAcc > 1:1152336/1‑150 (MQ=255) aaaGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCt < 2:778009/150‑1 (MQ=255) aGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTgg < 2:829281/150‑1 (MQ=255) ggCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTa > 2:410568/1‑150 (MQ=255) aCCTCCAGAGGTGCCCTATTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAg > 1:55678/1‑150 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacg > 1:240596/1‑114 (MQ=255) cTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCcggtaacg < 2:240596/114‑1 (MQ=255) | AAGTGAAGGCCGCCGGCCTGGCCAATGGCCTGCTCAGCATCGACCTGCTGCGCATCGTGCCTGAAGAAGCCAAGGCCAAGCGCATTCCGATCAATGGCGAAAAACCAGCGCTGAACTGATCGAGCTGCAACGAAAAAAAGGGCACCTCCAGAGGTGCCCTTTTTCGTGCTTCTCACGC‑AGTCCCGCGTAGGTGCGCGGCCGTCATGCGATCAGTAATCTGCCGGCGCCTCCAGCAACATCTGCCGAAACTCCGGTAACGGTAATGGCCGGCTGTGCAGATAACCCTGGTACAG > NC_002947/2246136‑2246428 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |