| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 219,777 | C→A | 6.0% | P8428Q (CCA→CAA) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 219,777 | 0 | C | A | 6.0% | 241.9 / 3.3 | 77 | P8428Q (CCA→CAA) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (38/33); new base A (3/2); total (42/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
TACTGGAACTACGTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGCGAGG > NC_002947/219629‑219926 | tACTGGAACTACGTCTACTCGGCCGCAGGTACCAGCGACGCAACCGCATGTTTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCca < 1:1599420/150‑1 (MQ=255) ggAACTACGTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGa < 1:1131036/150‑1 (MQ=255) ggAACTACGTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGa < 2:1613787/150‑1 (MQ=255) gAACTACGTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGACGGCACCAATGGCTTGAGCAAAGAAGCCAATACGGGCCGGAACAGCGATGTCACCCTGCACGATCTGAAACCTTCCGACAGTGTCGGCAAGCCACAGAc > 1:1104086/1‑150 (MQ=255) gTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATc < 1:382135/150‑1 (MQ=255) tCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATc < 2:972615/144‑1 (MQ=255) tCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATc > 1:972615/1‑144 (MQ=255) tCGGCCGCAGGTTCTACTGAAAGTATCACAGTATTGGGCGCCACCACTTGCTTGACCAAAGTCCAGTCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCGTACGACAGTGCCGGCAAGCCACAGACCACTATCGAACCg > 2:696318/1‑150 (MQ=255) ggCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTc < 2:1148458/150‑1 (MQ=255) ccGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCg > 1:122615/1‑150 (MQ=255) tACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGc > 1:1321124/1‑147 (MQ=255) tACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGc < 2:1321124/147‑1 (MQ=255) cTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAgg < 2:122615/150‑1 (MQ=255) tGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAatat > 1:1482235/1‑126 (MQ=255) tGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAatat < 2:1482235/126‑1 (MQ=255) tGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGc < 1:1341077/150‑1 (MQ=255) tGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTAAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGc > 1:1386982/1‑150 (MQ=255) aGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGAtt < 2:213413/150‑1 (MQ=255) tttCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATtct > 1:389871/1‑150 (MQ=255) aTTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTc < 2:1104086/150‑1 (MQ=255) ggcggcACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCTGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCaa < 1:1519593/128‑1 (MQ=255) ggcggcACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCaa > 2:1519593/1‑128 (MQ=255) ggcggcACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGACCGATTTGGCCAAGGCGATTCTCGGTCACTCCGaa < 2:415754/150‑1 (MQ=255) ggcACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCg > 2:1411259/1‑136 (MQ=255) ggcACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCg < 1:1411259/136‑1 (MQ=255) aCCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAg > 2:292577/1‑123 (MQ=255) aCCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAg < 1:292577/123‑1 (MQ=255) cAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGt < 1:1069231/150‑1 (MQ=255) ttGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAgg < 1:796716/115‑1 (MQ=255) ttGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAgg > 2:796716/1‑115 (MQ=255) gCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGAGACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCg > 2:1622505/1‑150 (MQ=255) tCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCAACAGACCAATATCGACTCGTCCGAGTTGGCCAAGGCGATTCTCGCTAACGAGGAGGTAAGGGTGCCAGGTGCTGAGACCa > 2:1440354/1‑150 (MQ=255) cAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCAtt > 2:1077858/1‑150 (MQ=255) aGGCTATCGGCCTGAACAGCGATGTCCCGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGGTTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTg > 1:1013854/1‑150 (MQ=255) aGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCAACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGt < 1:1336852/130‑1 (MQ=255) aGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCAACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGt < 1:1337056/130‑1 (MQ=255) aGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCAACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGt > 2:1337056/1‑130 (MQ=255) aGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCAACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGt > 2:1336852/1‑130 (MQ=255) ggCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGAttt > 1:114427/1‑93 (MQ=255) ggCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGAttt < 2:114427/93‑1 (MQ=255) ggCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGa > 1:1417165/1‑150 (MQ=255) cTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATa > 1:91684/1‑150 (MQ=255) tATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGt < 1:686095/109‑1 (MQ=255) tATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGt > 2:686095/1‑109 (MQ=255) aTCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTTGCCAAGGCGATTCTCGGTCACTCCGAAGCCACGGTGCCAGGTGCCGACACCATGCATAgc > 2:451493/1‑149 (MQ=255) aTCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGt < 2:91684/150‑1 (MQ=255) ggCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCAt > 1:1551246/1‑140 (MQ=255) ggCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCAt < 2:1551246/140‑1 (MQ=255) ggCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGt > 1:1275302/1‑150 (MQ=255) gCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTa > 2:68981/1‑150 (MQ=255) tGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACg < 2:1417165/150‑1 (MQ=255) gATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGAc > 2:942153/1‑150 (MQ=255) aTGTCACGCCGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGAca < 1:696318/150‑1 (MQ=255) tCACGCTGAACGATCTAAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGAcatca < 2:1386982/150‑1 (MQ=255) aCGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGAca > 2:801512/1‑145 (MQ=255) aCGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGAca < 1:801512/145‑1 (MQ=255) ggAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGCCCGATTTGGCCAAGGCGATTCTCGGTCCCTCCGAAGCATCGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCg < 1:451493/149‑1 (MQ=255) aaCTATCTTAAACCTTACGACAGTTCCGGCAAGCCACACACCAATATCGCCCCGTCCGATTTGGCCAATGCGATTCTCGGTCACTCCGAATCAACCTTCCCAGGTGACAACACCATTCATAGTGGTAACGGCAACGACATCATCTTCGGt < 1:1440354/150‑1 (MQ=255) aaCGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGt > 2:1544637/1‑150 (MQ=255) aaCGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGt > 1:1310193/1‑150 (MQ=255) cGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACg > 2:280478/1‑128 (MQ=255) cGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACg < 1:280478/128‑1 (MQ=255) gATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGAc < 2:1275302/150‑1 (MQ=255) gATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGAc > 1:1451738/1‑150 (MQ=255) aTCTGAAACCTTACGACAGTGCCTGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTACCAGATGCCGACACCATTCAGAGTGGTAACGGCAACGACATCATCTTCGGTGAcc > 2:1334630/1‑150 (MQ=255) aaCCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTACGGGGACCTGATCa > 1:895507/1‑150 (MQ=255) aCCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGAc < 2:1419144/40‑1 (MQ=255) aCCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGAc > 1:1419144/1‑40 (MQ=255) ttACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTc < 1:1049567/72‑1 (MQ=255) ttACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTc > 2:1049567/1‑72 (MQ=255) cAGTGCAGGCAAGCCACAGACAAATATCGACCCGTGCGATTTTGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACgg > 2:17695/1‑150 (MQ=255) aGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGACGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGGGACCTGATCACCCTCAACGgt > 1:1538782/1‑150 (MQ=255) aGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGgt > 1:913529/1‑150 (MQ=255) tGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATtct < 1:852031/54‑1 (MQ=255) tGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATtct > 2:852031/1‑54 (MQ=255) aaGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTTGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTgtc < 2:1410514/144‑1 (MQ=255) aaGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTTGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTgtc > 1:1410514/1‑144 (MQ=255) aaGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGCTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGc > 2:470283/1‑150 (MQ=255) ccACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGCGAg > 1:748935/1‑150 (MQ=255) cacaGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGaca > 1:969982/1‑78 (MQ=255) cacaGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGaca < 2:969982/78‑1 (MQ=255) cacaGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGCGAgg > 1:449718/1‑150 (MQ=255) cacaGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGCGAgg > 2:979821/1‑150 (MQ=255) | TACTGGAACTACGTCTACTCGGCCGCAGGTTCTACTGAAAGTTTCGCAGTATTGGGCGGCACCAATGGCTTGAGCAAAGTCCAGGCTATCGGCCTGAACAGCGATGTCACGCTGAACGATCTGAAACCTTACGACAGTGCCGGCAAGCCACAGACCAATATCGACCCGTCCGATTTGGCCAAGGCGATTCTCGGTCACTCCGAAGCAACGGTGCCAGGTGCCGACACCATTGATAGTGGTAACGGCAACGACATCATCTTCGGTGACCTGATCACCCTCAACGGTGTCGTCAGCGAGG > NC_002947/219629‑219926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |