| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,521,650 | C→T | 7.5% | A953V (GCC→GTC) | PP_2212 → | leucine‑rich repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,521,650 | 0 | C | T | 7.5% | 192.4 / 5.5 | 67 | A953V (GCC→GTC) | PP_2212 | leucine‑rich repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (27/35); new base T (3/2); total (30/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.07e-01 | |||||||||||
GCCGCGCTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATAT > NC_002947/2521505‑2521797 | gCCGCGCTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCgccgcc > 2:700750/1‑150 (MQ=255)gCCGCGCTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCgccgcc > 1:1487488/1‑150 (MQ=255) cgcTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCa < 2:340052/150‑1 (MQ=255) cTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGGCGCGtcgcccctcct < 1:377541/150‑6 (MQ=255) gATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTg > 2:369745/1‑150 (MQ=255) tGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACa < 1:464517/150‑1 (MQ=255) aacaaGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAg > 2:75922/1‑150 (MQ=255) caaGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGGGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGCTGACGGCCGACAGCATCCTGCGAGcc > 1:1314631/1‑150 (MQ=255) caaGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGcc > 1:178669/1‑150 (MQ=255) gCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGc < 2:1563024/150‑1 (MQ=255) ccGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGa > 1:841847/1‑150 (MQ=255) ccGCAGCCAGTCTTCGAGCGCCCGGTAGAACTGCAGGAAGCGCATGACCAGCAAGTGCTGTACATCTACCCCTGAATCGGTCCCGAGTTGCAGAAGAGGCCACGCGCCGCCCGCAGGTTGGCGGCCGGCAGCGTCCGGCGAGCCTGGCgc > 2:183715/1‑149 (MQ=255) cgaaGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGAc < 2:533453/147‑1 (MQ=255) cGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGAc < 1:810662/150‑1 (MQ=255) aGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTgg > 1:1360344/1‑143 (MQ=255) aGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTgg < 2:1360344/143‑1 (MQ=255) ccAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAg > 2:618471/1‑150 (MQ=255) tCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGc < 2:611286/150‑1 (MQ=255) tCGAGCGCCTGGCAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGc < 1:75922/150‑1 (MQ=255) gAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCt < 1:618471/150‑1 (MQ=255) gcgcCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGt > 1:907943/1‑150 (MQ=255) tGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCATGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTcgg > 1:620325/1‑150 (MQ=255) tGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTcgg > 2:809108/1‑150 (MQ=255) gTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTcggcc > 1:794776/1‑150 (MQ=255) cTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAg < 2:1487488/150‑1 (MQ=255) cTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAg < 1:938282/150‑1 (MQ=255) cAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAgggg < 2:1441983/150‑1 (MQ=255) aGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGc > 1:66295/1‑150 (MQ=255) gAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCaa > 2:210383/1‑150 (MQ=255) gcgcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAg < 2:1188720/77‑1 (MQ=255) gcgcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAg > 1:1188720/1‑77 (MQ=255) gcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGtt > 2:709413/1‑127 (MQ=255) gcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGtt < 1:709413/127‑1 (MQ=255) cATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGCTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAg < 2:1314631/150‑1 (MQ=255) aTGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAgg < 1:746025/114‑1 (MQ=255) aTGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAgg > 2:746025/1‑114 (MQ=255) gACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgggg > 1:1324948/1‑150 (MQ=255) ccAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCa > 2:105312/1‑150 (MQ=255) cAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTcggccggc > 1:432571/1‑129 (MQ=255) cAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTcggccggc < 2:432571/129‑1 (MQ=255) aGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCGTCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAgc > 2:1100279/1‑150 (MQ=255) aGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGc < 1:1295469/110‑1 (MQ=255) aGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGc > 2:1295469/1‑110 (MQ=255) gCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAgcg > 1:290942/1‑150 (MQ=255) cTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAgcgc < 2:1210612/150‑1 (MQ=255) aGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCGTCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCtt < 1:1100279/150‑1 (MQ=255) tGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGt < 2:66295/150‑1 (MQ=255) tGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGt < 2:290942/150‑1 (MQ=255) gTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGAt < 1:105312/150‑1 (MQ=255) ccTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAaca < 2:711323/127‑1 (MQ=255) ccTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAaca > 1:711323/1‑127 (MQ=255) ccTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgg < 2:68229/131‑1 (MQ=255) ccTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgg > 1:68229/1‑131 (MQ=255) ccTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAg < 2:907943/150‑1 (MQ=255) cTCAACCGCTGGGGCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGc < 1:210383/150‑1 (MQ=255) gCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGATGGGCCGCCCGCAGGTGGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGa < 2:178669/150‑1 (MQ=255) gCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGa < 1:700750/150‑1 (MQ=255) gCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGa < 2:710135/150‑1 (MQ=255) tGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGt < 1:183715/150‑1 (MQ=255) tgTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGttt < 2:1638/149‑1 (MQ=255) gTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGcc < 1:369745/150‑1 (MQ=255) gCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGc > 1:1417367/1‑150 (MQ=255) acctgcgggCGGCGCGTCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCa > 1:3252/7‑150 (MQ=255) aggaggGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCAc < 2:794776/150‑1 (MQ=255) ggaggGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAg > 1:871060/1‑88 (MQ=255) ggaggGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAg < 2:871060/88‑1 (MQ=255) ctgcgggCGGCGCGTCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGGGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGc > 1:1533008/5‑121 (MQ=255) ctgcgggCGGCGCGTCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGc < 2:1533008/117‑1 (MQ=255) ctgcgggCGGCGCGTCGCCC‑CAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgg > 2:240724/5‑100 (MQ=255) ctgcgggCGGCGCGTCGCCC‑CAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgg < 1:240724/96‑1 (MQ=255) gcgcCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCata > 1:1471524/1‑150 (MQ=255) cgccgcCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCatat < 1:809108/150‑1 (MQ=255) | GCCGCGCTCGATGTGGAGCTGGCGCGCGTGCAACAAGGCCCGCAGCCAGTCTTCGAGCGCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGCGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATAT > NC_002947/2521505‑2521797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |