| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 284,588 | T→A | 18.6% | intergenic (+34/+29) | betT‑II → / ← atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 284,588 | 0 | T | A | 18.6% | 179.7 / 33.8 | 75 | intergenic (+34/+29) | betT‑II/atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (29/32); new base A (9/5); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01 | |||||||||||
ACCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCT > NC_002947/284439‑284735 | aCCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTCTCCTGGCCTCTTCGCGGGCtt > 2:1407801/1‑150 (MQ=255) cGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCcgcg > 2:63142/1‑150 (MQ=255) ggCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAaga < 1:65875/150‑1 (MQ=255) ggCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAaga < 2:1185436/150‑1 (MQ=255) ggCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga < 1:63142/150‑1 (MQ=255) aGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGCCCAGTACGAGCAAAAGAGACGGTACCAGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGc > 1:1432832/1‑150 (MQ=255) aGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACACGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGc < 1:1441802/150‑1 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTTGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCcgcg > 2:543183/1‑141 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTTGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCcgcg < 1:543183/141‑1 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa < 1:1008526/143‑1 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa > 2:1008526/1‑143 (MQ=255) ccAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCa > 2:424328/1‑150 (MQ=255) aCTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAg < 1:641612/150‑1 (MQ=255) cTGGTGGGCTACAGCAAGGAGAAGATCATCATCGGCATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGc > 1:699102/1‑150 (MQ=255) ggCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGaaa > 1:1248542/1‑150 (MQ=255) tACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGt < 1:1076579/150‑1 (MQ=255) aGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCa > 1:1223111/1‑150 (MQ=255) cAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATc > 2:729282/1‑150 (MQ=255) aGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATccc > 1:1266758/1‑150 (MQ=255) aGCAGATCATCAACGAGATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCGGGCCTCTTCGGGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCaa < 2:226627/150‑1 (MQ=255) atcatcAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCcgc < 1:429204/103‑1 (MQ=255) atcatcAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCcgc > 2:429204/1‑103 (MQ=255) atcatcAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATg < 2:1102758/150‑1 (MQ=255) tcatcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGCCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATgg < 1:221309/150‑1 (MQ=255) tcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCTGGCAAGCCCGCGAag > 2:1396203/1‑103 (MQ=255) tcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCTGGCAAGCCCGCGAag < 1:1396203/103‑1 (MQ=255) cGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga > 1:329510/1‑100 (MQ=255) cGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga < 2:329510/100‑1 (MQ=255) ccTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa > 1:1311291/1‑92 (MQ=255) ccTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGaa < 2:1311291/92‑1 (MQ=255) cTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATc < 1:729282/150‑1 (MQ=255) cTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATc > 1:1399150/1‑150 (MQ=255) cAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACccgc < 2:1241725/150‑1 (MQ=255) cGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGtt < 2:699102/150‑1 (MQ=255) aGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcg < 2:1248542/150‑1 (MQ=255) gCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcg < 1:424328/150‑1 (MQ=255) gCACATGCAGTACCTGCACCTGGTCCGCACCTCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTAGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcg > 1:41884/1‑150 (MQ=255) caTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTa > 2:259135/1‑150 (MQ=255) aTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga < 2:1114745/72‑1 (MQ=255) aTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCAAGCCCGCGAaga > 1:1114745/1‑72 (MQ=255) aTGCAGTACCTGCACCTGGTCCGCGGACCAAGCTCTCCTGTCCGGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTaa < 1:714770/150‑1 (MQ=255) gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAg < 2:899793/95‑1 (MQ=255) gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAg > 1:899793/1‑95 (MQ=255) gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGa > 2:287007/1‑110 (MQ=255) gCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGa < 1:287007/110‑1 (MQ=255) cAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAatca < 2:1223111/150‑1 (MQ=255) aGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAatcat > 2:372661/1‑150 (MQ=255) tACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATcc < 2:1399150/150‑1 (MQ=255) aCCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCa > 2:490707/1‑150 (MQ=255) ccGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg < 2:1266758/150‑1 (MQ=255) gCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcgg > 2:526090/1‑125 (MQ=255) gCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcgg < 1:526090/125‑1 (MQ=255) cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGt < 1:451748/71‑1 (MQ=255) cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGt > 2:451748/1‑71 (MQ=255) cAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAcgc > 2:1630530/1‑150 (MQ=255) cctgtcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATc > 2:542579/1‑68 (MQ=255) cctgtcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATc < 1:542579/68‑1 (MQ=255) ccggtcctgGCCTCTTCGCGGGGTTGCTCGCGAAGAGGCCA‑G‑CGCGTTCTCGTTGATAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTcc < 2:41884/147‑1 (MQ=255) ctgtcctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGATGGGTCACGCGGTTGTccc < 1:875203/150‑1 (MQ=255) tgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCACCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACg > 1:140087/1‑150 (MQ=255) gCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGaaa < 2:1600449/51‑1 (MQ=255) gCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGaaa > 1:1600449/1‑51 (MQ=255) gCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGcc < 1:1630530/150‑1 (MQ=255) ctctTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 1:1142672/1‑150 (MQ=255) ctctTCGCGGGCAAGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 1:53943/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGGCAACCGCT‑AGAAAGGTGCATCCCCaa < 2:29442/62‑1 (MQ=17) tctTCGCGGGCAAGCCCGCGAAGAGGCCAGGACAGGCAACCGCT‑AGAAAGGTGCATCCCCaa > 1:29442/1‑62 (MQ=17) tctTCGCGGGCAAGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACg > 1:135374/1‑150 (MQ=255) tctTCGCGGGCAAGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACg > 2:1136154/1‑150 (MQ=255) ttCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTc > 1:548294/1‑150 (MQ=255) gggCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGGCGTtct > 2:444085/1‑150 (MQ=255) ggCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcg < 2:149710/90‑1 (MQ=255) ggCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcg > 1:149710/1‑90 (MQ=255) gCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAccatcac > 1:157382/1‑102 (MQ=255) gCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAccatcac < 2:157382/107‑6 (MQ=255) cTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCt > 1:1538018/1‑150 (MQ=255) | ACCTGAGCGAAGGCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGTCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCA‑GACAGGCAACCGCT‑AGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCCT > NC_002947/284439‑284735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |