Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,799,421 | G→A | 5.9% | A94A (GCG→GCA) | PP_3359 → | hydroxycinnamic acid degradation regulator |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,799,421 | 0 | G | A | 5.9% | 200.7 / 2.1 | 68 | A94A (GCG→GCA) | PP_3359 | hydroxycinnamic acid degradation regulator |
Reads supporting (aligned to +/- strand): ref base G (33/31); new base A (2/2); total (35/33) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 |
CGGCCCATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACG > NC_002947/3799276‑3799563 | cGGCCCATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCCCCTGCGTTGGCAATCGACCCCCCGCCAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTgg > 1:300282/1‑150 (MQ=255) ccATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gt > 1:578854/1‑150 (MQ=255) ccATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gt > 1:1324585/1‑150 (MQ=255) tGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTgcg < 1:479920‑M2/150‑4 (MQ=255) cTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gtgcgcgtg > 2:1518591/1‑150 (MQ=255) cAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCg < 1:513246/150‑1 (MQ=255) aaTTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCgg > 1:1181240/1‑150 (MQ=255) ttCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACaa < 2:629968/150‑1 (MQ=255) ttCCGCCCTGCCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACaa < 2:901558/150‑1 (MQ=255) cGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcg < 1:1342852/150‑1 (MQ=255) cTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgttcagcattgg < 1:899664‑M2/148‑30 (MQ=255) cTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCAC‑GGCCAGCgcgcgctcttccagtttgttcagcattgg > 2:899664‑M2/1‑119 (MQ=255) tGGCGATCATAAAGATGAGCCCCGGGCCGAGACCTGCCCACCTGGCGCGTGCGTTGTCAATCGCCCCCCCGCAAGTAGTGCCAATGCTTAACAGACTGGAAGAGCGCGCGCGGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGt < 2:300282/150‑1 (MQ=255) tcatcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAAGGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGa > 1:108089/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCCATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:31589/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 2:1366626/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:381576/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:180439/1‑150 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 2:381576/150‑1 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt > 2:970330/1‑150 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 1:1366626/150‑1 (MQ=255) cAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTg < 2:534900/99‑1 (MQ=255) cAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTg > 1:534900/1‑99 (MQ=255) gAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAg < 2:1181240/150‑1 (MQ=255) gAACACCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAg > 2:533979/1‑150 (MQ=255) aTGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAg < 2:578854/150‑1 (MQ=255) tGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAgg > 1:1516186/1‑150 (MQ=255) gCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGc > 2:223235/1‑150 (MQ=255) ggCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGcc < 1:1389159/148‑1 (MQ=255) ggCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGcc > 2:1389159/1‑148 (MQ=255) gCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCt < 1:751690/149‑1 (MQ=255) gCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCt > 2:751690/1‑149 (MQ=255) cgcgTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGt < 2:1069192/150‑1 (MQ=255) tgcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgtt > 2:885419‑M2/1‑69 (MQ=255) tgcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgtt < 1:885419‑M2/89‑21 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAACTCGGGCGAGGCCCTGTTGAAGGAGTTGAAg < 1:1311802/150‑1 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAg < 1:1143742/150‑1 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAg < 1:1143743/150‑1 (MQ=255) ttGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGcac < 2:689619/150‑1 (MQ=255) tGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGcaca > 1:1214575/1‑150 (MQ=255) cAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATcg > 1:1497519/1‑150 (MQ=255) aaTCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAATCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGTAGTTGAAGGACATcgc > 1:516169/1‑150 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcgc > 2:1521951/1‑81 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcgc < 1:1521951/81‑1 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 2:1582983/98‑1 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt > 1:1582983/1‑98 (MQ=255) cccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGc > 2:1526545/1‑134 (MQ=255) cccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGc < 1:1526545/134‑1 (MQ=255) ccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGc > 2:1152890/1‑150 (MQ=255) gTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAg > 1:841873/1‑150 (MQ=255) gCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGc < 2:841873/150‑1 (MQ=255) aaTGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGa > 1:280180/1‑132 (MQ=255) aaTGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGa < 2:280180/132‑1 (MQ=255) aaTGCGGACCAAACTGGAAGAGCGCTCGCTGGCC‑GTTCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGATCAAATCGGGCTAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGAc < 2:702414/150‑1 (MQ=255) gCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATc < 2:1214575/150‑1 (MQ=255) cTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTAt > 1:1072982/1‑66 (MQ=255) cTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTAt < 2:1072982/66‑1 (MQ=255) tGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGTCGACAGCGATCACCAGGCGACATCCa > 2:1362272/1‑150 (MQ=255) aaCAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAAc < 1:970330/150‑1 (MQ=255) aaCAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAAc > 2:617887/1‑150 (MQ=255) aaaCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACctc > 1:840160/1‑150 (MQ=255) aaCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACctct > 1:1398778/1‑150 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACa > 1:871868/1‑122 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACa < 2:871868/122‑1 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCGGAGCAAATCGAGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCTATCACCAGGCGACATCCAACCtctc < 2:180439/150‑1 (MQ=255) gAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGAt < 2:108089/150‑1 (MQ=255) gAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGAt > 2:125922/1‑150 (MQ=255) agCGCGCGCTGGCC‑GTgcgcgtgcgctcttccagtttgttcagcattggcacgacttgcggggggtcgattgccaacgcacgcgccaggtcggcctgcatcagcccggggttctggtcgatgatcgccagggcggaaaattgggccgggc < 1:1234058‑M2/150‑135 (MQ=255) | CGGCCCATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGGCCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACG > NC_002947/3799276‑3799563 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |