| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,449,791 | G→C | 9.5% | intergenic (+262/‑180) | nicR → / → nicA | HTH‑type transcriptional repressor NicR/nicotinate dehydrogenase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,449,791 | 0 | G | C | 9.5% | 230.0 / 14.3 | 74 | intergenic (+262/‑180) | nicR/nicA | HTH‑type transcriptional repressor NicR/nicotinate dehydrogenase subunit A |
| Reads supporting (aligned to +/- strand): ref base G (27/40); new base C (3/4); total (30/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
CGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCTTT > NC_002947/4449643‑4449936 | cgTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCgcggg < 2:840283/150‑1 (MQ=255) gCGGGGTCACCCGCTAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGgcgcc > 2:1510085/1‑149 (MQ=255) cGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGAACAGCGCGATGCGCCGCGCGGGCGGCGCt > 2:505014/1‑149 (MQ=255) cGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGAACAGCGCGATGCGCCGCGCGGGCGGCGCt < 1:505014/149‑1 (MQ=255) ggTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgcatcgc < 1:959376/150‑6 (MQ=21) tCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGttt < 2:657604/150‑1 (MQ=255) ccGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCg < 2:369245/150‑1 (MQ=255) cgcgAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCgg < 1:664771/150‑1 (MQ=255) gcgAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCggg > 2:1111698/1‑150 (MQ=255) gccggccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACa > 1:1609396/1‑150 (MQ=255) ccggccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACaa > 1:1111985/1‑150 (MQ=255) ggccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCACTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATc < 1:516087/150‑1 (MQ=255) ggccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGACGCGTTTCGCCTATGGGCGGTTAAACCCGCTCACCCACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATc < 1:1600097/150‑1 (MQ=37) gccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCt > 1:1257774/1‑150 (MQ=255) gccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCCCGCGCGgcgcatc > 1:74918/1‑125 (MQ=255) gccCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCCCGCGCGgcgcatc < 2:74918/128‑4 (MQ=255) cccTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCtt < 1:137282/150‑1 (MQ=255) ctgctgGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCa < 1:813589/150‑1 (MQ=255) gctgGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATc < 2:1038570/150‑1 (MQ=255) gacAATCTCCACCTGCTGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTg > 2:1426632/3‑150 (MQ=255) gCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACaa > 2:1392655/1‑138 (MQ=255) gCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACaa < 1:1392655/138‑1 (MQ=255) ccAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc < 2:1111985/150‑1 (MQ=255) aaTCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGccc > 1:565058/1‑150 (MQ=255) tctcCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCcca < 2:1138167/150‑1 (MQ=255) tctcCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCcca > 1:1138167/1‑150 (MQ=255) ctcCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCccac < 2:1604742/150‑1 (MQ=255) ccACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCGTCATCCCTGCCccacca < 1:1111698/150‑1 (MQ=255) cTGCCGATCACCGTTGCCGCCACCACCGTATTCGAGGGTAGACCGGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACcatcat > 1:1134375/1‑150 (MQ=255) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATa < 1:1089800/150‑1 (MQ=255) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATa < 2:1551332/150‑1 (MQ=255) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATa < 2:1609396/150‑1 (MQ=255) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTtc > 1:678759/1‑150 (MQ=255) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTtc > 2:1190196/1‑150 (MQ=255) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgcatcgc < 1:1416780/103‑6 (MQ=25) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgcatcgc > 2:1416837/1‑98 (MQ=25) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgcatcgc > 2:1416780/1‑98 (MQ=25) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgcatcgc < 1:1416837/103‑6 (MQ=25) aTCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTtct < 2:1424704/150‑1 (MQ=255) tCACCTTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTtctc < 1:735358/150‑1 (MQ=255) gccACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc < 1:1588356/121‑1 (MQ=255) gccACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc > 2:1588356/1‑121 (MQ=255) gccACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCAt < 1:1190196/150‑1 (MQ=255) accaccGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCAtctc > 1:1502595/1‑150 (MQ=255) accGTATTCGCGGGTAAACCCGCTACTCTAGACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTgg > 1:43831/1‑150 (MQ=255) cgcgGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGcttc > 2:537455/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGcttct > 2:1246725/1‑150 (MQ=255) gggTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTg < 1:1426632/150‑1 (MQ=255) cccGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGctcactc > 1:287687/1‑150 (MQ=255) cccGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCACCATAGTTCTCTGCAAATTCATCTCTg < 2:1627227/131‑1 (MQ=255) cccGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCACCATAGTTCTCTGCAAATTCATCTCTg > 1:1627227/1‑131 (MQ=255) tCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTc > 2:385215/1‑150 (MQ=255) cTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt < 2:1134375/150‑1 (MQ=255) cTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt < 1:1378734/150‑1 (MQ=255) tACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATg < 1:537455/150‑1 (MQ=255) acacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGc < 2:1489847/122‑1 (MQ=255) acacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGc > 1:1489847/1‑122 (MQ=255) acacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCCCACTCATCTCATGTAg < 2:933597/150‑1 (MQ=255) cacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGt < 2:565058/150‑1 (MQ=255) acacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGc > 2:1372691/1‑124 (MQ=255) acacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGc < 1:1372691/124‑1 (MQ=255) cacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGAGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGa < 1:751711/150‑1 (MQ=255) aaaCTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGt < 2:1200184/50‑1 (MQ=255) aaaCTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGt > 1:1200184/1‑50 (MQ=255) aaaCTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTa < 1:752008/150‑1 (MQ=255) cGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTACCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTAc < 2:43831/150‑1 (MQ=255) gggCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt < 2:1406633/132‑1 (MQ=255) gggCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt > 1:1406633/1‑132 (MQ=255) ggCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGaa < 1:638251/150‑1 (MQ=255) gCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCt < 1:859479/149‑1 (MQ=255) gCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCt > 2:859479/1‑149 (MQ=255) gcgcGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTc > 2:866935/1‑150 (MQ=255) tGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGa < 2:287687/150‑1 (MQ=255) gcgcgGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCtt < 2:1502595/150‑1 (MQ=255) cgcgGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTCCCGCACCGCTAGCGTCATTTCAGTCCttt < 2:1257774/150‑1 (MQ=255) | CGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCTTT > NC_002947/4449643‑4449936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |