| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6060487 = | 94 (1.610) | 11 (0.210) | 11/236 | 3.5 | 12.5% | intergenic (+67/+114) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| ? | NC_002947 | 6060574 = | 70 (1.340) | intergenic (+154/+27) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6060648‑6060487‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAGCTGCTTG > NC_002947/6060574‑6060721 TGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGC < 1:290592/150‑1 gggTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCC > 2:247078/4‑150 GTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGCCGTGCCCGCGAAACAAGCGCCGCGGTGCCTGGCACCGGCTTCGCCGCTGTTCGCGCGCAAGCCC > 2:262347/1‑150 attGGTTTATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCC < 1:56834/147‑1 AGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCC > 2:230213/1‑150 AGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCC < 1:49306/150‑1 GGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCC > 1:1348692/1‑150 GGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCA < 1:330696/150‑1 GGGTTGATCAAATACCTGAAACTACAGAAGAGATGCTGAAGCGCGACGGGGAGGATGACGCTTTCCCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCA < 2:1410721/150‑1 GTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACA < 1:969989/150‑1 GTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACA > 2:969989/1‑150 GTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACA > 2:811030/1‑150 TGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTC < 1:1144756/92‑1 TGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTC > 2:1144756/1‑92 GCTTTACCCGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATT > 1:575246/1‑150 GCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCC > 1:1179829/1‑92 GCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCC < 2:1179829/92‑1 CGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCC < 2:423383/58‑1 CGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCC > 1:423383/1‑58 AAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCG > 2:921394/1‑150 CAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCAT > 2:1296152/1‑76 CAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCAT < 1:1296152/76‑1 AAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTT < 2:1249176/96‑1 AAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTT > 1:1249176/1‑96 AGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGG > 2:797720/1‑150 GCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAACAGCGCCGGGT > 1:62904/1‑150 GCGGTGCATGGCACCGGCTTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCT > 2:720785/1‑150 GCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAAC < 1:921394/150‑1 GCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGT > 2:1101903/1‑130 GCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGT < 1:1101903/130‑1 CCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTT > 1:943932/1‑140 CCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTT < 2:943932/140‑1 CCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTC < 1:761888/61‑1 CCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTC > 2:761888/1‑61 CGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCC > 2:1005566/1‑150 CAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCATGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAGCTGCTT < 1:1395532/150‑1 AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGATCCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGCGCTAGTCCTGAATCCCTTGCATGAACGCCAGCTGCTTG < 1:487527/150‑1 TGGTTCCAGGGGTTGATGAAATACCTGAAACCAAAGAAGAAAGGCTGAAGCCCGACGGGGATGATGACGCTTTACCTGTGGGAGCGGGCGTGCCCGCGAAACAAGCGACGCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6060648‑6060487‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAGCTGCTTG > NC_002947/6060574‑6060721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |