New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 528049 | 15 (0.260) | 16 (0.290) | 13/250 | 3.3 | 53.0% | noncoding (1284/2902 nt) | PP_23SC | 23S ribosomal RNA |
? | NC_002947 | = 701118 | NA (NA) | noncoding (1265/2902 nt) | PP_23SD | 23S ribosomal RNA | |||||
Rejected: Coverage evenness skew score above cutoff. |
ACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACG > NC_002947/527901‑528079 | aCCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCAc > 2:1198228/1‑150 (MQ=32) aCCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTAATAAGCCTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGaaa < 1:1270325/150‑1 (MQ=12) ccGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAg > 2:618417/1‑150 (MQ=32) atACTGGTATCAGCTTACGATGATGCGGTAGAGGAGCGTTGTGTAAGCTTGTGAACGTGAGTTGAGACGCTAGCTGGAGGTATCGGAAGGGCGAATGCGGACACAAGTAACGACAATGCGAGGGAAAAACTCGCACGCCGAAAGACCatg < 2:550041/149‑3 (MQ=11) tACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGATGACATGAGTAACGACACTGCGAGAGAAACACTAGAACGCCGAAAGACCAAgg > 2:1396157/1‑150 (MQ=11) cGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGtt > 2:151620/1‑150 (MQ=32) ggTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTc < 2:546142/150‑1 (MQ=32) atcatcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTg > 2:957818/1‑150 (MQ=32) tcatcTTACGATGATGCGGTAGAGGAGCATTATGTAAGCGTGTGGAGGTGAGTTCAGAAGCTTGCGGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTgc < 2:1414071/150‑1 (MQ=11) tcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCa > 2:423931/1‑150 (MQ=32) tcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCa > 2:850687/1‑150 (MQ=32) cTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTgc < 1:344507/146‑1 (MQ=32) cTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTgc > 2:344507/1‑146 (MQ=32) cTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCaa > 1:597635/1‑150 (MQ=32) tACGATTATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAATCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGCAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACg < 1:1396157/150‑1 (MQ=12) | ACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACG > NC_002947/527901‑528079 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |