Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	1,851,914	Δ1 bp	coding (958/2241 nt)	relA →	ATP:GTP 3'‑pyrophosphotransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,851,914	0	G	.	100.0%	455.8 / NA	97	coding (958/2241 nt)	relA	ATP:GTP 3'‑pyrophosphotransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (50/47);  total (50/47)

AAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCT  >  NC_002947/1851773‑1852058                                                                                                                                              |                                                                                                                                                 aaGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCg                                                                                                                                         <  1:2287161/150‑1 (MQ=255)      gCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAAc                                                                                                                                    >  2:202583/1‑150 (MQ=255)            cAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAg                                                                                                                              <  1:1010490/150‑1 (MQ=255)            cAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAg                                                                                                                              <  2:1712053/150‑1 (MQ=255)            cAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAg                                                                                                                              >  1:1606426/1‑150 (MQ=255)             aaaGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAgg                                                                                                                             >  2:300697/1‑150 (MQ=255)              aaGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGga                                                                                                                            <  1:1008244/150‑1 (MQ=255)                   cTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       >  1:80266/1‑150 (MQ=255)                   cTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       >  1:2019181/1‑150 (MQ=255)                   cTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       <  1:379474/150‑1 (MQ=255)                   cTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTACCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       >  2:1090453/1‑150 (MQ=255)                    tGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACgg                                                                                                                      <  2:860881/150‑1 (MQ=255)                      gAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACATCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCt                                                                                                                    >  1:599699/1‑150 (MQ=255)                            aGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCGACCCCAAGGAGAACGGCTACCGCt                                                                                                              >  2:2157641/1‑150 (MQ=255)                              ccAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCCCACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCg                                                                                                            >  1:915767/1‑150 (MQ=255)                              ccAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCg                                                                                                            <  1:32272/150‑1 (MQ=255)                              ccAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCg                                                                                                            >  1:1432590/1‑150 (MQ=255)                              ccAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCg                                                                                                            >  1:981762/1‑150 (MQ=255)                              ccAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCAACTGCTACCCCGCGCTGGGCGAGAAACACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCg                                                                                                            >  1:1789393/1‑150 (MQ=255)                                   tCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCGACCCCAAGGAGAACGGCTACCGCTCGTTGca                                                                                                       <  1:2157641/150‑1 (MQ=255)                                    cTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGcac                                                                                                      >  1:268579/1‑150 (MQ=255)                                      acgacgTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCCAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCacac                                                                                                    >  1:30586/1‑150 (MQ=255)                                            tgcgtgcgGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGt                                                                                              <  2:2598375/150‑1 (MQ=255)                                                tgcggtgcgCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATc                                                                                          <  1:1088779/150‑1 (MQ=255)                                                 gcggtgcgCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCg                                                                                         <  1:772192/150‑1 (MQ=255)                                                  cggtgcgCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGCACTCgg                                                                                        <  2:1432590/150‑1 (MQ=255)                                                          gTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAgg                                                                                <  1:1090453/150‑1 (MQ=255)                                                            gCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGc                                                                              <  2:1789393/150‑1 (MQ=255)                                                               ggTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg                                                                           <  2:2515196/150‑1 (MQ=255)                                                                   ccGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGc                                                                       >  2:69429/1‑150 (MQ=255)                                                                     ggAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGccc                                                                                     >  2:814652/1‑134 (MQ=255)                                                                     ggAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGccc                                                                                     <  1:814652/134‑1 (MQ=255)                                                                        aaTCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTg                                                                                                  <  2:1667135/118‑1 (MQ=255)                                                                        aaTCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTg                                                                                                  >  1:1667135/1‑118 (MQ=255)                                                                          tCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGt                                                                >  1:998946/1‑150 (MQ=255)                                                                           ccGCGACTGCTACACCTCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCCACAACCCCAAGGAGCACGAACACGGCTCTTGTCACACGTCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAggcg                                                               <  1:54366/150‑3 (MQ=255)                                                                           ccGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTg                                                               <  2:2019181/150‑1 (MQ=255)                                                                            cgcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGc                                                              >  2:54366/1‑150 (MQ=255)                                                                             gcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAg                                                                                                                              <  2:1100675/85‑1 (MQ=255)                                                                             gcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAg                                                                                                                              >  1:1100675/1‑85 (MQ=255)                                                                             gcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTATGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCa                                                             >  1:1394626/1‑150 (MQ=255)                                                                                aCTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGAt                                                          <  1:858062/150‑1 (MQ=255)                                                                                aCTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGAt                                                          <  2:998946/150‑1 (MQ=255)                                                                                  tGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCTTTAGCATAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATcc                                                        >  1:2659458/1‑150 (MQ=255)                                                                                   gCTACACCGCGCTGGGCATCGTGCGCACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCg                                                       >  1:2373348/1‑150 (MQ=255)                                                                                    cTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAAc                                                                                                                                    >  2:650329/1‑72 (MQ=255)                                                                                    cTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAAc                                                                                                                                    <  1:650329/72‑1 (MQ=255)                                                                                     tACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       >  1:1137396/1‑84 (MQ=255)                                                                                     tACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACg                                                                                                                       <  2:1137396/84‑1 (MQ=255)                                                                                     tACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg                                                                           <  2:270918/128‑1 (MQ=255)                                                                                     tACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg                                                                           >  1:270918/1‑128 (MQ=255)                                                                                         ccGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCa                                                 >  2:582081/1‑150 (MQ=255)                                                                                         ccGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCAATTTGCTGGAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCa                                                 <  1:1513224/150‑1 (MQ=255)                                                                                          cgcgCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGGTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCAc                                                >  2:1344745/1‑150 (MQ=255)                                                                                           gcgcTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACg                                               <  2:268579/150‑1 (MQ=255)                                                                                            cgcTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTAGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACgg                                              <  1:300697/150‑1 (MQ=255)                                                                                               tGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCAt                                           >  1:2465991/1‑150 (MQ=255)                                                                                                         gCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAaga                                  <  2:544037/149‑1 (MQ=255)                                                                                                         gCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAaga                                  >  1:544037/1‑149 (MQ=255)                                                                                                           acacCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTAc                                                    >  2:856977/1‑129 (MQ=255)                                                                                                           acacCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTAc                                                    <  1:856977/129‑1 (MQ=255)                                                                                                           acacCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGc                               >  2:2250371/1‑150 (MQ=255)                                                                                                            cacCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGcc                              >  2:1281803/1‑150 (MQ=255)                                                                                                             acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg                                                                           <  2:838855/104‑1 (MQ=255)                                                                                                             acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg                                                                           >  1:838855/1‑104 (MQ=255)                                                                                                             acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATcc                                                        >  2:1184907/1‑123 (MQ=255)                                                                                                             acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATcc                                                        <  1:1184907/123‑1 (MQ=255)                                                                                                              ccTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTGGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGa                            >  1:651403/1‑150 (MQ=255)                                                                                                                ttGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTAc                                                                                                                  >  1:2072540/1‑62 (MQ=255)                                                                                                                ttGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTAc                                                                                                                  <  2:2072540/62‑1 (MQ=255)                                                                                                                   tgGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg                       <  1:2404901/150‑1 (MQ=255)                                                                                                                   tgGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg                       <  1:1281803/150‑1 (MQ=255)                                                                                                                   tgGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg                       <  1:1466309/150‑1 (MQ=255)                                                                                                                   tgGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGACGTCCCCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg                       <  1:202583/150‑1 (MQ=255)                                                                                                                     gcggcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGTCATGCACGAAGAGGCCGAACTTGGc                     <  2:30586/150‑1 (MQ=255)                                                                                                                     gcggcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGc                     >  1:1463999/1‑150 (MQ=255)                                                                                                                      cggcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCg                    <  2:1606426/150‑1 (MQ=255)                                                                                                                        gcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAg                                                                                 >  2:861342/1‑87 (MQ=255)                                                                                                                        gcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAg                                                                                 <  1:861342/87‑1 (MQ=255)                                                                                                                         cATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTAt                 <  1:69429/150‑1 (MQ=255)                                                                                                                            atTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATgcg              >  1:385484/1‑150 (MQ=255)                                                                                                                              tCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGcc            >  1:931176/1‑150 (MQ=255)                                                                                                                                ccAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCg                                                       <  2:689345/105‑1 (MQ=255)                                                                                                                                ccAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCg                                                       >  1:689345/1‑105 (MQ=255)                                                                                                                                ccAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGACGAACTTGGCGTATGCGCCCa          >  2:2725223/1‑150 (MQ=255)                                                                                                                                 cAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCAc         >  2:585390/1‑150 (MQ=255)                                                                                                                                 cAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCAc         >  2:2057170/1‑150 (MQ=255)                                                                                                                                 cAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCAc         >  1:587227/1‑150 (MQ=255)                                                                                                                                   aGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGa                                                                                  >  1:9741/1‑75 (MQ=255)                                                                                                                                   aGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGa                                                                                  <  2:9741/75‑1 (MQ=255)                                                                                                                                    gcaGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGTCCACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTgg      >  1:204784/3‑150 (MQ=255)                                                                                                                                     gAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGgc     <  1:2178556/150‑1 (MQ=255)                                                                                                                                     gAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGgc     <  2:915767/150‑1 (MQ=255)                                                                                                                                     gAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGgc     <  2:981762/150‑1 (MQ=255)                                                                                                                                        ttCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGc                               <  1:1381195/121‑1 (MQ=255)                                                                                                                                        ttCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGc                               >  2:1381195/1‑121 (MQ=255)                                                                                                                                        ttCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCt  >  1:1475183/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                                 AAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCT  >  NC_002947/1851773‑1852058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑