| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 997737 = | 51 (1.110) | 12 (0.290) | 10/238 | 2.9 | 22.2% | intergenic (‑139/+93) | PP_0860/PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor |
| ? | NC_002947 | 997772 = | 38 (0.910) | intergenic (‑174/+58) | PP_0860/PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor | |||||
TCTTCTTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGC > NC_002947/997589‑997883 | tcttctTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTaaa > 2:661893/1‑150 (MQ=255) cttcttCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCTGCTAAAg < 1:390345/150‑1 (MQ=255) ttcACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGc > 2:1023775/1‑150 (MQ=255) cagcacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGAGGCGTGTATTATGCCTTGATACACAAAAGCCCCGCTCACGGGGATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTGTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTc < 2:94116/147‑1 (MQ=255) ctacgacaaggccttctctacccacttcgccaaccaggcggccgggcgcacggaactgttgaccaccagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTcc < 2:1014319‑M1/10‑1 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGc < 1:776914/145‑1 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGc > 2:776914/1‑145 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTg > 2:1027007/1‑150 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTg > 1:763832/1‑150 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTg > 1:1084533/1‑150 (MQ=255) gacaaggccttctctacccacttcgctaaccaggcggncgggcgcacngcactgttgaccacgagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgccggccccttcgcggctaAAGCCGCtcctcaa < 1:556031‑M1/14‑4 (MQ=255) ctcACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGc > 1:353763/1‑150 (MQ=255) ccttctctacccacttcgccaaccaggcggccgggcgcacggcactgttgaccaccagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgcgggcctcttcgcggctaAAGCCGCTCCTGCACCGGCaa < 2:877724‑M1/21‑1 (MQ=255) tGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAg < 1:1027007/150‑1 (MQ=255) gctgcCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCgg < 1:36234/150‑1 (MQ=255) cacttcgccaaccaggcggccgggcgcacggcactgttgaccaccagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTCCTGCACCGGCAACGCAGGAGCgg > 2:895009‑M1/119‑150 (MQ=255) ctgcCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGACGGGCTGCTTTTCGAGTTGTCTCAAAACGCTCGTGTGCGTGTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGc > 1:256810/1‑150 (MQ=255) acttcgccaaccaggcgcccgggcgcacggcactgttgaccagaactgtggccttcggatttcagggttgggttgatctgttgaagggctgcgcctgtgccggccctttcgcggctaAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGc > 2:556031‑M1/118‑150 (MQ=255) tgcCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCt > 1:1014319/1‑150 (MQ=255) ccGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCGGATTTTCGTGTTGTCTGTTCGGGCCTCTTCGCAGCTAAAGCGGCTGCCGCACCGGCAACGCAGGAGCGACTTc > 2:624955/1‑150 (MQ=255) gACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGcc < 1:747771/150‑1 (MQ=255) cgcgGCGTGCATTATGCCTTGATAAACCAAAGCCCCGCTAACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGaaa < 2:187564/150‑1 (MQ=255) gcggcgTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCCTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAg < 2:37976/150‑1 (MQ=255) ggcgTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAggg < 1:909140/150‑1 (MQ=255) gCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGc > 1:545141/1‑150 (MQ=255) cATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCTCGGCTAAAGCCGCTCCTGCACCGGCCACGCAGCAGCGGCTTCAGGCGCGAAAGGGCCGGcc > 1:166170/1‑149 (MQ=255) aggcgttGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAg < 1:16781/144‑1 (MQ=255) aTGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAg > 2:16781/1‑149 (MQ=255) acacAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCtt < 2:545141/150‑1 (MQ=255) cacaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTc > 2:360910/1‑150 (MQ=255) caAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa > 1:667115/1‑150 (MQ=255) caAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa > 2:1123722/1‑150 (MQ=255) caccagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgccggccctttcgcggctaAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGc > 1:1121479‑M1/78‑110 (MQ=255) caccagcgtgcacttctgatgtcagggttgggttgatctgttgaagggctgcgcctgtgccggccctttcgcggctaAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGc < 2:1121479‑M1/33‑1 (MQ=255) aaaaGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAAc < 2:667115/150‑1 (MQ=255) aaaGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACa > 1:10136/1‑150 (MQ=255) ccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaa < 2:974497/150‑1 (MQ=255) cGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGCTcaac < 2:763832/150‑1 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCa > 2:1030657/1‑89 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCa < 1:1030657/89‑1 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTAGAGGTGGCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaac > 1:1128078/1‑150 (MQ=255) aaTGAACGGGGCCGGGAGGGCTGCTTTTCGTGAAGTTCGGGTGGTCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGa < 2:1128078/150‑1 (MQ=255) tGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAggg < 2:1016785/106‑1 (MQ=255) tGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAggg > 1:1016785/1‑106 (MQ=255) gAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAAGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCAGatcg > 1:413223/1‑147 (MQ=255) tgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCtt < 1:772487‑M1/35‑1 (MQ=255) tgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCtt > 2:772487‑M1/40‑74 (MQ=255) tgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCt < 1:162869‑M1/34‑1 (MQ=255) tgttgaagggctgcgcctgtgccggccctttcgcggctgAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCt > 2:162869‑M1/40‑73 (MQ=255) tgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggtg > 1:142511/1‑150 (MQ=255) ggctgcgcctgtgccggccctttcgcggctaAAGCCGCTCCTGCACCGGCAACGCAGGAGc < 1:698838‑M1/30‑1 (MQ=255) ggctgcgcctgtgccggccctttcgcggctaAAGCCGCTCCTGCACCGGCAACGCAGGAGc > 2:698838‑M1/32‑61 (MQ=255) tgttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGt > 2:1127627/1‑150 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCa < 1:933330/123‑1 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCa > 2:933330/1‑123 (MQ=255) tCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGt < 2:10136/150‑1 (MQ=255) tCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGACCTGCATGTGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGt > 1:70523/1‑150 (MQ=255) cctgtgccggccctttcgcggctgAAGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCTTTAGCCGCGAAGAGGCCCGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGt < 1:877724‑M1/126‑1 (MQ=255) ttCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCt > 2:753585/1‑150 (MQ=255) cgcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGa > 1:325710/1‑84 (MQ=255) cgcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGa < 2:325710/84‑1 (MQ=255) gcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaaccc < 2:654925/90‑1 (MQ=255) gcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaaccc > 1:654925/1‑90 (MQ=255) gcgGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGt < 1:753585/150‑1 (MQ=255) cTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGc < 2:130164/150‑1 (MQ=255) | TCTTCTTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCTAAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGC > NC_002947/997589‑997883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |