| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 43,457 | Δ1 bp | 9.5% | intergenic (+23/+70) | PP_0040 → / ← cadA‑I | hypothetical protein/cadmium translocating P‑type ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 43,457 | 0 | T | . | 9.5% | 217.1 / 17.9 | 74 | intergenic (+23/+70) | PP_0040/cadA‑I | hypothetical protein/cadmium translocating P‑type ATPase |
| Reads supporting (aligned to +/- strand): ref base T (34/33); new base . (4/3); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.92e-01 | |||||||||||
ATCAAGTCGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCAACAG > NC_002947/43310‑43606 | aTCAAGTCGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGa > 1:1494728/1‑150 (MQ=255) gTCGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTAAGGCATGGTTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTATGGGACGT‑GCGCTGATc‑gcg > 2:505287/1‑150 (MQ=255) cGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCa < 2:1402839/150‑1 (MQ=255) cGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCa < 2:1783444/150‑1 (MQ=255) gTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACg > 1:184109/1‑150 (MQ=255) tttCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGa > 1:1498179/1‑150 (MQ=255) ttCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGACATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGAc > 2:421466/1‑150 (MQ=255) cGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGAccc < 1:2334602/150‑1 (MQ=255) gTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCg > 1:2268210/1‑150 (MQ=255) ggTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGtacttc < 1:1657051/150‑1 (MQ=255) gtCATGAGCCTCACAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGC‑GATCAGCGCACGACCCGtacttttct < 1:481012/150‑5 (MQ=38) tGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCa > 2:1215272/1‑150 (MQ=255) cgatctaaaGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAgg < 1:2291448/144‑1 (MQ=255) aGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAgg < 2:2268210/150‑1 (MQ=255) cTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCGGTACTTCTACTTCAGGGCa > 2:1786269/1‑150 (MQ=255) aaGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCCAGACCCGTGCTTCTACTTCAGGtagatcg > 2:2291448/1‑144 (MQ=255) gCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTccc > 1:582823/1‑150 (MQ=255) cATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCt < 2:1498179/150‑1 (MQ=255) ttGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTa > 2:1729087/1‑150 (MQ=255) cTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGGCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTc > 2:311942/1‑150 (MQ=255) gCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCAt < 1:1999475/150‑1 (MQ=255) ggCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGa < 2:582823/150‑1 (MQ=255) cTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGC‑GATCAGCGCACGACCCg > 2:2125948/1‑109 (MQ=38) cTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGC‑GATCAGCGCACGACCCg < 1:2125948/109‑1 (MQ=38) aTGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCa < 1:1215272/150‑1 (MQ=255) tCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGCGAGAGAAAAGTACGGGTCGTAGGGATGGCA‑GC‑CTCGGCCCGTAGTTCTTCTTCAGGTCATTTCCCGGCTTAGCTTCAGGTTTGAAGCTCAGGGAt > 1:1571343/1‑150 (MQ=255) aCCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCa > 2:1543226/1‑150 (MQ=255) aCCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGACCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCa < 1:505287/150‑1 (MQ=255) aGTGCGGAAAGGCCCTTGAAAGCCTAAAGCGCATAGGGATCGATAAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGAGC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCTTGCTTAGCTTCATGATTGATGCTCAGGGATCAGGTGc < 2:1050905/150‑1 (MQ=255) cGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCt < 1:421466/150‑1 (MQ=255) ggAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTg < 2:184109/150‑1 (MQ=255) aaaGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCg > 1:125729/1‑150 (MQ=255) ggCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTa > 2:2146533/1‑150 (MQ=255) ggCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTa < 2:423723/150‑1 (MQ=255) gCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGC‑GATCAGCGCACGAc > 2:1784544/1‑75 (MQ=37) gCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGC‑GATCAGCGCACGAc < 1:1784544/75‑1 (MQ=37) ccTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGc > 1:1856914/1‑150 (MQ=255) ccTTGAAAGCCTCAAGCGCATCGGGATCGACGACTGAGAGAAAAGTACGCGATGT‑GCGCTTATC‑GCGCCCGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGc > 1:1214984/1‑150 (MQ=255) cTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGt < 1:2079223/91‑1 (MQ=255) cTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGGCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGt > 2:2079223/1‑91 (MQ=255) gAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAAc < 2:1494728/150‑1 (MQ=255) aaGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAg < 2:1571343/150‑1 (MQ=255) gcATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGt < 1:232434/150‑1 (MQ=255) gcATCGGGATCGACGAGTGAGAGAAAAGTACGGGACGT‑ACGCTGATC‑GCGCACGACTCGTACTTCTACTTAAGGTCATTTACCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCATCTGCGGTAGGCCAGCACGCGCAAGGCGt > 2:950997/1‑150 (MQ=255) cATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGtt < 2:1214984/150‑1 (MQ=255) tCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGa < 2:1859649/150‑1 (MQ=255) gATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAgg > 2:450131/1‑110 (MQ=255) gATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAgg < 1:450131/110‑1 (MQ=255) gATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgac > 1:602878/1‑150 (MQ=255) aTCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgacg > 1:1269298/1‑150 (MQ=255) acgaGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCa > 1:2204064/1‑150 (MQ=255) cgaGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCaa < 2:1269298/150‑1 (MQ=255) cgaGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGCTCATTGACGTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCaa < 1:1895824/150‑1 (MQ=255) gaGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCgg < 1:1903899/114‑1 (MQ=255) gaGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCgg > 2:1903899/1‑114 (MQ=255) gagagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgacga > 2:2324524/1‑141 (MQ=255) gagagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgacga < 1:2324524/141‑1 (MQ=255) agagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTccc < 1:1193910/64‑1 (MQ=255) agagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTccc > 2:1193910/1‑64 (MQ=255) agagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAgtgt < 1:56868/150‑1 (MQ=255) gagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGc < 1:1486854/128‑1 (MQ=255) gagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGc > 2:1486854/1‑128 (MQ=255) gagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGtgtg < 1:1729087/150‑1 (MQ=255) gagaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGtgtg < 1:1543226/150‑1 (MQ=255) agaAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTgg > 2:1783265/1‑150 (MQ=255) gaAAAGTATGGGTCGC‑GCGCTGATC‑GCGCCCGCCGCGTACTTCTACTGCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGAGCAAGGCTGTGAAGACGACCATAAGTGTGGa < 2:868874/150‑1 (MQ=255) tACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTc > 1:1586875/1‑150 (MQ=255) cGGGTCGT‑GCGC‑GATCAGCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCAt > 1:661065/1‑150 (MQ=255) ggggCGT‑GCGC‑GATCAGCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCACGGCGTTGAAGACGTTCAACAGTGTGGAGCCCTCaag > 2:226672/1‑148 (MQ=255) ggTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgac > 1:153077/1‑125 (MQ=255) ggTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAgac < 2:153077/125‑1 (MQ=255) cgcTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCaa > 2:1582451/1‑150 (MQ=255) cgcTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCaa > 2:14044/1‑150 (MQ=255) gcTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGTTTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCAAc > 1:286143/1‑150 (MQ=255) tGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCAACAg > 1:2182794/1‑150 (MQ=255) | ATCAAGTCGGTTTCGTAGCCGGTGTCATGAGCCTCAAAGCTGCATTGGCCTGCGGCTTACGGCATGGCTCACCTGAGTGCGGAAAGGCCCTTGAAAGCCTCAAGCGCATCGGGATCGACGAGTGAGAGAAAAGTACGGGTCGT‑GCGCTGATC‑GCGCACGACCCGTACTTCTACTTCAGGTCATTTCCCTGCTTAGCTTCATGATTGAAGCTCAGGGATCAGGTGCTTCTGCGGTAGGCCAACAGGCGCAAGGCGTTGAAGACGACCAACAGTGTGGAGCCCTCATGGATCGCAACAG > NC_002947/43310‑43606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |