| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 310001 | 69 (0.780) | 8 (0.100) | 8/230 | NT | 10.8% | intergenic (‑166/+31) | PP_0255/PP_0256 | hypothetical protein/putative oxidoreductase |
| ? | NC_002947 | = 310014 | 68 (0.830) | intergenic (‑179/+18) | PP_0255/PP_0256 | hypothetical protein/putative oxidoreductase | |||||
ATAGGGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/309848‑310001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagccctgTTCCGTGGCGGCTCAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGTGTTACTCGTCGGATTTCCGTTGCCAGCCACGCCTCTTAGCCTCAAA < NC_002947/310014‑309867 ATAGGGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGC > 2:49207/1‑150 AGGGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAA < 1:1503417/146‑1 AGGGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAA > 2:1503417/1‑146 GGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTG > 1:1033986/1‑150 GATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGc < 2:1605457/150‑2 GTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCC > 1:1766866/1‑117 GTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCC < 2:1766866/117‑1 AACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTCAGGGCT > 2:278082/1‑130 AACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTGTTCCGTGGCGGCTCAGGGCT < 1:278082/130‑1 TGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCC < 1:2266841/47‑1 TGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCC > 2:2266841/1‑47 TATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAA > 1:1405615/1‑36 TATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAA < 2:1405615/36‑1 GCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAAC < 1:942598/128‑1 GCTGTCTGAGACCTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAAC > 2:942598/1‑128 TGAGACCTTTATGAAAAAGCCCTGTTCCGTGGCGGCTCAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGT > 2:1953287/1‑126 TGAGACCTTTATGAAAAAGCCCTGTTCCGTGGCGGCTCAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGT < 1:1953287/126‑1 CTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGT < 1:870597/120‑1 CTTTATGACAAAGCCCTGAGCCGCCACGGAACAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGT > 2:870597/1‑120 AAAGCCCTGTTCCGTGGCGGCTCAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGTGTTACTCGTCGGATTTCCGTTGCCAGCCACGCCTCTTAG < 1:2257581/150‑1 TGTTCCGTGGCGGCACCGGGCATCGTATTAAAGGTCTCAGACAGCTTGAAAACGATAAAGTGTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGTGTTACTCGTCGGATTTCCGTTGCCAGCCACGCCTCTTAGCCTCAAA > 2:1779731/1‑150 ATAGGGATGACGAGGCGAATTTGAGGCTAAGAGGCGTGGCTGGCAACGGAAATCCGACGAGTAACACGAGTTGTACACAATTCTCTAACTTGCTGTATTTACTATGAAACTTTATCGTTTTCAGGCTGTCTGAGACCTTTATGACAAAGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/309848‑310001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagccctgTTCCGTGGCGGCTCAGGGCTTTGTCATAAAGGTCTCAGACAGCCTGAAAACGATAAAGTTTCATAGTAAATACAGCAAGTTAGAGAATTGTGTACAACTCGTGTTACTCGTCGGATTTCCGTTGCCAGCCACGCCTCTTAGCCTCAAA < NC_002947/310014‑309867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |