| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 837839 | 73 (0.830) | 6 (0.070) | 6/242 | NT | 7.2% | coding (129/585 nt) | pth | peptidyl‑tRNA hydrolase |
| ? | NC_002947 | = 837870 | 84 (0.980) | coding (98/585 nt) | pth | peptidyl‑tRNA hydrolase | |||||
TGCCACCAGTATCGCTTCCGGCTTGATGCGGAAGAAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/837689‑837839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgCCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAAAGTATTTCGGCCTGAC < NC_002947/837870‑837819 TGCCACCAGTATCGCTTCCGGCTTGATGCGGAAGAAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTT < 1:1420066/150‑1TGCCACCAGTATCGCTTCCGGCTTGATGCGGAAGAAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTT > 1:1513229/1‑150 ACCAGTATCGCTTCCGGCTTGATGCGGAAGAAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTttca > 2:1869776/1‑146 AAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTT < 1:816859/116‑1 AAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTT > 2:816859/1‑116 TTGGCCAAGGCCGCTACGGACTGGCCGCCGCGGATCATGTAGGAGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGCCAGGCCGAAATACTTTTTGCCAGCCCCCAGCGCGTTTCGCTCACCGCTGACAAca > 2:111306/1‑148 gGGACTGGCCGCTGGGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGCCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAAAGTATTTCGGCCTGAC < 1:111306/149‑1 GCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGCCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAAAGTATTTCG < 1:334054/133‑1 GCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGCCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAAAGTATTTCG > 2:334054/1‑133 GTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGCCAGCGCCCAGCGTGTTTCGCTGACCGCTGA < 1:1066758/113‑1 GTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGCCAGCGCCCAGCGTGTTTCGCTGACCGCTGA > 2:1066758/1‑113 TGCCACCAGTATCGCTTCCGGCTTGATGCGGAAGAAATTGGCCAAGGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/837689‑837839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgCCAGCGCCCAGCGTGTTTCGCTGACCGCTGACAAAAAGTATTTCGGCCTGAC < NC_002947/837870‑837819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |